Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
PCGF1Q9BSM1 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCGF1Q9BSM1 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCGF1Q9BSM1 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.07■□□□□ 0.64
PCGF1Q9BSM1 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.06■□□□□ 0.64
PCGF1Q9BSM1 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
PCGF1Q9BSM1 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCGF1Q9BSM1 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.06■□□□□ 0.64
PCGF1Q9BSM1 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.06■□□□□ 0.64
PCGF1Q9BSM1 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.06■□□□□ 0.64
PCGF1Q9BSM1 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.06■□□□□ 0.64
PCGF1Q9BSM1 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCGF1Q9BSM1 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.05■□□□□ 0.64
PCGF1Q9BSM1 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
PCGF1Q9BSM1 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCGF1Q9BSM1 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCGF1Q9BSM1 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCGF1Q9BSM1 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.05■□□□□ 0.64
PCGF1Q9BSM1 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCGF1Q9BSM1 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCGF1Q9BSM1 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCGF1Q9BSM1 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.05■□□□□ 0.64
PCGF1Q9BSM1 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCGF1Q9BSM1 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCGF1Q9BSM1 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCGF1Q9BSM1 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.04■□□□□ 0.64
PCGF1Q9BSM1 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCGF1Q9BSM1 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCGF1Q9BSM1 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCGF1Q9BSM1 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCGF1Q9BSM1 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCGF1Q9BSM1 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
PCGF1Q9BSM1 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
PCGF1Q9BSM1 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCGF1Q9BSM1 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCGF1Q9BSM1 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCGF1Q9BSM1 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.03■□□□□ 0.64
PCGF1Q9BSM1 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCGF1Q9BSM1 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCGF1Q9BSM1 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.03■□□□□ 0.64
PCGF1Q9BSM1 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.03■□□□□ 0.64
PCGF1Q9BSM1 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.03■□□□□ 0.64
PCGF1Q9BSM1 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
PCGF1Q9BSM1 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCGF1Q9BSM1 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCGF1Q9BSM1 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCGF1Q9BSM1 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCGF1Q9BSM1 AL139125.2-201ENST00000623134 1869 ntBASIC19.03■□□□□ 0.64
PCGF1Q9BSM1 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.03■□□□□ 0.64
PCGF1Q9BSM1 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
PCGF1Q9BSM1 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCGF1Q9BSM1 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCGF1Q9BSM1 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCGF1Q9BSM1 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCGF1Q9BSM1 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCGF1Q9BSM1 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCGF1Q9BSM1 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCGF1Q9BSM1 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PCGF1Q9BSM1 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
PCGF1Q9BSM1 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCGF1Q9BSM1 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCGF1Q9BSM1 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.01■□□□□ 0.63
PCGF1Q9BSM1 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.01■□□□□ 0.63
PCGF1Q9BSM1 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCGF1Q9BSM1 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCGF1Q9BSM1 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCGF1Q9BSM1 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.01■□□□□ 0.63
PCGF1Q9BSM1 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
PCGF1Q9BSM1 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCGF1Q9BSM1 AC012676.1-201ENST00000574705 1949 ntBASIC19.01■□□□□ 0.63
PCGF1Q9BSM1 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCGF1Q9BSM1 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCGF1Q9BSM1 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.01■□□□□ 0.63
PCGF1Q9BSM1 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19■□□□□ 0.63
PCGF1Q9BSM1 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19■□□□□ 0.63
PCGF1Q9BSM1 LBH-205ENST00000407930 756 ntTSL 2 BASIC19■□□□□ 0.63
PCGF1Q9BSM1 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19■□□□□ 0.63
PCGF1Q9BSM1 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19■□□□□ 0.63
PCGF1Q9BSM1 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19■□□□□ 0.63
PCGF1Q9BSM1 AC008406.3-201ENST00000620001 1374 ntBASIC19■□□□□ 0.63
PCGF1Q9BSM1 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
PCGF1Q9BSM1 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCGF1Q9BSM1 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCGF1Q9BSM1 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC18.99■□□□□ 0.63
PCGF1Q9BSM1 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCGF1Q9BSM1 TMEM202-AS1-202ENST00000565181 2325 ntBASIC18.99■□□□□ 0.63
PCGF1Q9BSM1 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCGF1Q9BSM1 LSM7-203ENST00000585409 512 ntTSL 2 BASIC18.99■□□□□ 0.63
PCGF1Q9BSM1 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC18.99■□□□□ 0.63
PCGF1Q9BSM1 MIR6724-1-201ENST00000616420 92 ntBASIC18.99■□□□□ 0.63
PCGF1Q9BSM1 MIR6724-2-201ENST00000616483 92 ntBASIC18.99■□□□□ 0.63
PCGF1Q9BSM1 MIR6724-4-201ENST00000617390 92 ntBASIC18.99■□□□□ 0.63
PCGF1Q9BSM1 MIR6724-3-201ENST00000622482 92 ntBASIC18.99■□□□□ 0.63
PCGF1Q9BSM1 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC18.99■□□□□ 0.63
PCGF1Q9BSM1 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCGF1Q9BSM1 LSR-205ENST00000427250 1606 ntTSL 2 BASIC18.99■□□□□ 0.63
PCGF1Q9BSM1 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC18.98■□□□□ 0.63
PCGF1Q9BSM1 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCGF1Q9BSM1 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCGF1Q9BSM1 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms