Protein–RNA interactions for Protein: Q96QR1

SCGB3A1, Secretoglobin family 3A member 1, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCGB3A1Q96QR1 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SCGB3A1Q96QR1 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC16.31■□□□□ 0.2
SCGB3A1Q96QR1 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
SCGB3A1Q96QR1 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SCGB3A1Q96QR1 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SCGB3A1Q96QR1 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCGB3A1Q96QR1 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCGB3A1Q96QR1 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC16.31■□□□□ 0.2
SCGB3A1Q96QR1 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SCGB3A1Q96QR1 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCGB3A1Q96QR1 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCGB3A1Q96QR1 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SCGB3A1Q96QR1 AC137767.1-201ENST00000602918 1920 ntBASIC16.31■□□□□ 0.2
SCGB3A1Q96QR1 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SCGB3A1Q96QR1 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCGB3A1Q96QR1 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCGB3A1Q96QR1 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SCGB3A1Q96QR1 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SCGB3A1Q96QR1 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCGB3A1Q96QR1 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCGB3A1Q96QR1 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCGB3A1Q96QR1 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC16.3■□□□□ 0.2
SCGB3A1Q96QR1 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SCGB3A1Q96QR1 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SCGB3A1Q96QR1 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCGB3A1Q96QR1 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SCGB3A1Q96QR1 CHML-204ENST00000638121 920 ntTSL 2 BASIC16.3■□□□□ 0.2
SCGB3A1Q96QR1 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCGB3A1Q96QR1 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCGB3A1Q96QR1 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
SCGB3A1Q96QR1 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCGB3A1Q96QR1 C1orf229-201ENST00000623686 2258 ntBASIC16.29■□□□□ 0.2
SCGB3A1Q96QR1 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCGB3A1Q96QR1 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCGB3A1Q96QR1 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCGB3A1Q96QR1 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SCGB3A1Q96QR1 AC021231.2-201ENST00000594613 730 ntBASIC16.29■□□□□ 0.2
SCGB3A1Q96QR1 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SCGB3A1Q96QR1 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCGB3A1Q96QR1 GUSBP5-202ENST00000510805 1989 ntBASIC16.29■□□□□ 0.2
SCGB3A1Q96QR1 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SCGB3A1Q96QR1 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC16.29■□□□□ 0.2
SCGB3A1Q96QR1 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
SCGB3A1Q96QR1 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCGB3A1Q96QR1 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SCGB3A1Q96QR1 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCGB3A1Q96QR1 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
SCGB3A1Q96QR1 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCGB3A1Q96QR1 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC16.28■□□□□ 0.2
SCGB3A1Q96QR1 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCGB3A1Q96QR1 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SCGB3A1Q96QR1 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCGB3A1Q96QR1 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SCGB3A1Q96QR1 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC16.28■□□□□ 0.2
SCGB3A1Q96QR1 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC16.28■□□□□ 0.2
SCGB3A1Q96QR1 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCGB3A1Q96QR1 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SCGB3A1Q96QR1 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SCGB3A1Q96QR1 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SCGB3A1Q96QR1 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SCGB3A1Q96QR1 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SCGB3A1Q96QR1 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SCGB3A1Q96QR1 ANOS2P-203ENST00000472227 1816 ntBASIC16.27■□□□□ 0.2
SCGB3A1Q96QR1 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
SCGB3A1Q96QR1 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SCGB3A1Q96QR1 USP48-205ENST00000421625 2818 ntTSL 2 BASIC16.27■□□□□ 0.2
SCGB3A1Q96QR1 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SCGB3A1Q96QR1 BOD1-206ENST00000480951 814 ntTSL 2 BASIC16.27■□□□□ 0.2
SCGB3A1Q96QR1 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SCGB3A1Q96QR1 CHST11-202ENST00000546689 756 ntTSL 2 BASIC16.27■□□□□ 0.2
SCGB3A1Q96QR1 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC16.27■□□□□ 0.2
SCGB3A1Q96QR1 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SCGB3A1Q96QR1 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SCGB3A1Q96QR1 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SCGB3A1Q96QR1 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC16.27■□□□□ 0.19
SCGB3A1Q96QR1 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC16.27■□□□□ 0.19
SCGB3A1Q96QR1 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC16.27■□□□□ 0.19
SCGB3A1Q96QR1 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SCGB3A1Q96QR1 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCGB3A1Q96QR1 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC16.26■□□□□ 0.19
SCGB3A1Q96QR1 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCGB3A1Q96QR1 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCGB3A1Q96QR1 AC087741.3-201ENST00000624270 1347 ntBASIC16.26■□□□□ 0.19
SCGB3A1Q96QR1 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCGB3A1Q96QR1 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCGB3A1Q96QR1 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCGB3A1Q96QR1 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCGB3A1Q96QR1 DUX4L29-201ENST00000425409 679 ntBASIC16.26■□□□□ 0.19
SCGB3A1Q96QR1 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCGB3A1Q96QR1 AC044849.2-201ENST00000606596 710 ntBASIC16.26■□□□□ 0.19
SCGB3A1Q96QR1 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCGB3A1Q96QR1 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SCGB3A1Q96QR1 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC16.26■□□□□ 0.19
SCGB3A1Q96QR1 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SCGB3A1Q96QR1 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC16.26■□□□□ 0.19
SCGB3A1Q96QR1 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC16.25■□□□□ 0.19
SCGB3A1Q96QR1 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SCGB3A1Q96QR1 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SCGB3A1Q96QR1 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC16.25■□□□□ 0.19
SCGB3A1Q96QR1 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms