Protein–RNA interactions for Protein: Q96NZ1

FOXN4, Forkhead box protein N4, humanhuman

Predictions only

Length 517 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4Q96NZ1 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
FOXN4Q96NZ1 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
FOXN4Q96NZ1 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
FOXN4Q96NZ1 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
FOXN4Q96NZ1 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
FOXN4Q96NZ1 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
FOXN4Q96NZ1 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
FOXN4Q96NZ1 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.43■□□□□ 0.86
FOXN4Q96NZ1 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
FOXN4Q96NZ1 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
FOXN4Q96NZ1 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.43■□□□□ 0.86
FOXN4Q96NZ1 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
FOXN4Q96NZ1 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
FOXN4Q96NZ1 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
FOXN4Q96NZ1 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
FOXN4Q96NZ1 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
FOXN4Q96NZ1 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
FOXN4Q96NZ1 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
FOXN4Q96NZ1 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.41■□□□□ 0.86
FOXN4Q96NZ1 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
FOXN4Q96NZ1 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.41■□□□□ 0.86
FOXN4Q96NZ1 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.41■□□□□ 0.86
FOXN4Q96NZ1 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.41■□□□□ 0.86
FOXN4Q96NZ1 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
FOXN4Q96NZ1 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
FOXN4Q96NZ1 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.41■□□□□ 0.86
FOXN4Q96NZ1 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
FOXN4Q96NZ1 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
FOXN4Q96NZ1 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.4■□□□□ 0.86
FOXN4Q96NZ1 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.4■□□□□ 0.86
FOXN4Q96NZ1 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
FOXN4Q96NZ1 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.4■□□□□ 0.86
FOXN4Q96NZ1 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
FOXN4Q96NZ1 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.4■□□□□ 0.86
FOXN4Q96NZ1 AC133561.1-201ENST00000568600 2415 ntBASIC20.4■□□□□ 0.86
FOXN4Q96NZ1 MIR4508-201ENST00000584178 70 ntBASIC20.4■□□□□ 0.86
FOXN4Q96NZ1 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
FOXN4Q96NZ1 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
FOXN4Q96NZ1 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
FOXN4Q96NZ1 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
FOXN4Q96NZ1 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
FOXN4Q96NZ1 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
FOXN4Q96NZ1 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
FOXN4Q96NZ1 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
FOXN4Q96NZ1 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
FOXN4Q96NZ1 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
FOXN4Q96NZ1 AC009299.2-201ENST00000482477 511 ntBASIC20.39■□□□□ 0.85
FOXN4Q96NZ1 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
FOXN4Q96NZ1 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
FOXN4Q96NZ1 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
FOXN4Q96NZ1 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
FOXN4Q96NZ1 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
FOXN4Q96NZ1 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.38■□□□□ 0.85
FOXN4Q96NZ1 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
FOXN4Q96NZ1 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
FOXN4Q96NZ1 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
FOXN4Q96NZ1 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
FOXN4Q96NZ1 AC019171.1-201ENST00000601251 1056 ntBASIC20.38■□□□□ 0.85
FOXN4Q96NZ1 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.38■□□□□ 0.85
FOXN4Q96NZ1 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
FOXN4Q96NZ1 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
FOXN4Q96NZ1 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
FOXN4Q96NZ1 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
FOXN4Q96NZ1 C9orf163-202ENST00000624034 2573 ntBASIC20.38■□□□□ 0.85
FOXN4Q96NZ1 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
FOXN4Q96NZ1 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.37■□□□□ 0.85
FOXN4Q96NZ1 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.37■□□□□ 0.85
FOXN4Q96NZ1 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
FOXN4Q96NZ1 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.37■□□□□ 0.85
FOXN4Q96NZ1 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.37■□□□□ 0.85
FOXN4Q96NZ1 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
FOXN4Q96NZ1 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
FOXN4Q96NZ1 AC120024.1-201ENST00000562672 995 ntBASIC20.37■□□□□ 0.85
FOXN4Q96NZ1 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.37■□□□□ 0.85
FOXN4Q96NZ1 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.36■□□□□ 0.85
FOXN4Q96NZ1 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
FOXN4Q96NZ1 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
FOXN4Q96NZ1 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
FOXN4Q96NZ1 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
FOXN4Q96NZ1 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
FOXN4Q96NZ1 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
FOXN4Q96NZ1 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
FOXN4Q96NZ1 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
FOXN4Q96NZ1 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
FOXN4Q96NZ1 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.36■□□□□ 0.85
FOXN4Q96NZ1 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
FOXN4Q96NZ1 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.36■□□□□ 0.85
FOXN4Q96NZ1 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
FOXN4Q96NZ1 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
FOXN4Q96NZ1 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
FOXN4Q96NZ1 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.35■□□□□ 0.85
FOXN4Q96NZ1 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
FOXN4Q96NZ1 AC011551.1-201ENST00000614101 683 ntBASIC20.35■□□□□ 0.85
FOXN4Q96NZ1 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.35■□□□□ 0.85
FOXN4Q96NZ1 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
FOXN4Q96NZ1 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.35■□□□□ 0.85
FOXN4Q96NZ1 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
FOXN4Q96NZ1 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
FOXN4Q96NZ1 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
FOXN4Q96NZ1 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms