Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SPG11Q96JI7 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.59■□□□□ 0.73
SPG11Q96JI7 AC092171.4-201ENST00000609130 632 ntBASIC19.59■□□□□ 0.73
SPG11Q96JI7 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.59■□□□□ 0.73
SPG11Q96JI7 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.59■□□□□ 0.73
SPG11Q96JI7 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.59■□□□□ 0.73
SPG11Q96JI7 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SPG11Q96JI7 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SPG11Q96JI7 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SPG11Q96JI7 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SPG11Q96JI7 AL137784.2-201ENST00000607332 1000 ntBASIC19.57■□□□□ 0.72
SPG11Q96JI7 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.57■□□□□ 0.72
SPG11Q96JI7 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC19.57■□□□□ 0.72
SPG11Q96JI7 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SPG11Q96JI7 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
SPG11Q96JI7 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.57■□□□□ 0.72
SPG11Q96JI7 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC19.57■□□□□ 0.72
SPG11Q96JI7 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
SPG11Q96JI7 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SPG11Q96JI7 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SPG11Q96JI7 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
SPG11Q96JI7 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC19.56■□□□□ 0.72
SPG11Q96JI7 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.56■□□□□ 0.72
SPG11Q96JI7 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SPG11Q96JI7 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SPG11Q96JI7 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.56■□□□□ 0.72
SPG11Q96JI7 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SPG11Q96JI7 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.56■□□□□ 0.72
SPG11Q96JI7 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SPG11Q96JI7 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.55■□□□□ 0.72
SPG11Q96JI7 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SPG11Q96JI7 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SPG11Q96JI7 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.55■□□□□ 0.72
SPG11Q96JI7 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
SPG11Q96JI7 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SPG11Q96JI7 AC241377.3-202ENST00000626088 1088 ntBASIC19.55■□□□□ 0.72
SPG11Q96JI7 AC241585.3-202ENST00000628937 1088 ntBASIC19.55■□□□□ 0.72
SPG11Q96JI7 AC245100.8-202ENST00000629247 1058 ntBASIC19.55■□□□□ 0.72
SPG11Q96JI7 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.55■□□□□ 0.72
SPG11Q96JI7 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SPG11Q96JI7 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SPG11Q96JI7 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SPG11Q96JI7 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.54■□□□□ 0.72
SPG11Q96JI7 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.54■□□□□ 0.72
SPG11Q96JI7 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.54■□□□□ 0.72
SPG11Q96JI7 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SPG11Q96JI7 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.54■□□□□ 0.72
SPG11Q96JI7 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.54■□□□□ 0.72
SPG11Q96JI7 MIR3181-201ENST00000578512 73 ntBASIC19.54■□□□□ 0.72
SPG11Q96JI7 AL358852.1-201ENST00000623174 1268 ntBASIC19.54■□□□□ 0.72
SPG11Q96JI7 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SPG11Q96JI7 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SPG11Q96JI7 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SPG11Q96JI7 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SPG11Q96JI7 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SPG11Q96JI7 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SPG11Q96JI7 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SPG11Q96JI7 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.53■□□□□ 0.72
SPG11Q96JI7 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.53■□□□□ 0.72
SPG11Q96JI7 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
SPG11Q96JI7 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SPG11Q96JI7 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
SPG11Q96JI7 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SPG11Q96JI7 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
SPG11Q96JI7 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SPG11Q96JI7 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
SPG11Q96JI7 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SPG11Q96JI7 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SPG11Q96JI7 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC19.52■□□□□ 0.71
SPG11Q96JI7 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
SPG11Q96JI7 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.52■□□□□ 0.71
SPG11Q96JI7 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SPG11Q96JI7 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SPG11Q96JI7 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
SPG11Q96JI7 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SPG11Q96JI7 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.51■□□□□ 0.71
SPG11Q96JI7 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.51■□□□□ 0.71
SPG11Q96JI7 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.51■□□□□ 0.71
SPG11Q96JI7 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
SPG11Q96JI7 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SPG11Q96JI7 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SPG11Q96JI7 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SPG11Q96JI7 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
SPG11Q96JI7 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.51■□□□□ 0.71
SPG11Q96JI7 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SPG11Q96JI7 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SPG11Q96JI7 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC19.5■□□□□ 0.71
SPG11Q96JI7 AC004911.1-201ENST00000416316 871 ntBASIC19.5■□□□□ 0.71
SPG11Q96JI7 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
SPG11Q96JI7 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.5■□□□□ 0.71
SPG11Q96JI7 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SPG11Q96JI7 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC19.5■□□□□ 0.71
SPG11Q96JI7 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SPG11Q96JI7 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
SPG11Q96JI7 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SPG11Q96JI7 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SPG11Q96JI7 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SPG11Q96JI7 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.5■□□□□ 0.71
SPG11Q96JI7 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SPG11Q96JI7 AC131274.2-201ENST00000580697 1507 ntBASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms