Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC21.5■■□□□ 1.03
SLC47A1Q96FL8 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SLC47A1Q96FL8 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SLC47A1Q96FL8 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.49■■□□□ 1.03
SLC47A1Q96FL8 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SLC47A1Q96FL8 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.49■■□□□ 1.03
SLC47A1Q96FL8 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SLC47A1Q96FL8 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
SLC47A1Q96FL8 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SLC47A1Q96FL8 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SLC47A1Q96FL8 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SLC47A1Q96FL8 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
SLC47A1Q96FL8 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SLC47A1Q96FL8 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
SLC47A1Q96FL8 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.48■■□□□ 1.03
SLC47A1Q96FL8 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
SLC47A1Q96FL8 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.48■■□□□ 1.03
SLC47A1Q96FL8 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SLC47A1Q96FL8 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SLC47A1Q96FL8 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC21.48■■□□□ 1.03
SLC47A1Q96FL8 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.47■■□□□ 1.03
SLC47A1Q96FL8 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SLC47A1Q96FL8 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SLC47A1Q96FL8 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.47■■□□□ 1.03
SLC47A1Q96FL8 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SLC47A1Q96FL8 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SLC47A1Q96FL8 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC21.47■■□□□ 1.03
SLC47A1Q96FL8 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.47■■□□□ 1.03
SLC47A1Q96FL8 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SLC47A1Q96FL8 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SLC47A1Q96FL8 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SLC47A1Q96FL8 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SLC47A1Q96FL8 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SLC47A1Q96FL8 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SLC47A1Q96FL8 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SLC47A1Q96FL8 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
SLC47A1Q96FL8 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SLC47A1Q96FL8 RARRES2P2-201ENST00000394842 485 ntBASIC21.46■■□□□ 1.03
SLC47A1Q96FL8 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
SLC47A1Q96FL8 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.46■■□□□ 1.03
SLC47A1Q96FL8 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.46■■□□□ 1.03
SLC47A1Q96FL8 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
SLC47A1Q96FL8 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SLC47A1Q96FL8 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SLC47A1Q96FL8 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.46■■□□□ 1.03
SLC47A1Q96FL8 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.03
SLC47A1Q96FL8 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
SLC47A1Q96FL8 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SLC47A1Q96FL8 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
SLC47A1Q96FL8 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SLC47A1Q96FL8 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.45■■□□□ 1.02
SLC47A1Q96FL8 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SLC47A1Q96FL8 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
SLC47A1Q96FL8 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SLC47A1Q96FL8 HSD17B1P1-201ENST00000590052 955 ntBASIC21.45■■□□□ 1.02
SLC47A1Q96FL8 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.02
SLC47A1Q96FL8 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC21.45■■□□□ 1.02
SLC47A1Q96FL8 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SLC47A1Q96FL8 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SLC47A1Q96FL8 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.45■■□□□ 1.02
SLC47A1Q96FL8 EP400NL-214ENST00000641289 2402 ntBASIC21.45■■□□□ 1.02
SLC47A1Q96FL8 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
SLC47A1Q96FL8 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SLC47A1Q96FL8 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
SLC47A1Q96FL8 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
SLC47A1Q96FL8 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SLC47A1Q96FL8 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
SLC47A1Q96FL8 AL592293.1-201ENST00000502889 1188 ntBASIC21.44■■□□□ 1.02
SLC47A1Q96FL8 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SLC47A1Q96FL8 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
SLC47A1Q96FL8 AC018755.3-202ENST00000596210 929 ntBASIC21.44■■□□□ 1.02
SLC47A1Q96FL8 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SLC47A1Q96FL8 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SLC47A1Q96FL8 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SLC47A1Q96FL8 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.44■■□□□ 1.02
SLC47A1Q96FL8 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.44■■□□□ 1.02
SLC47A1Q96FL8 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
SLC47A1Q96FL8 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SLC47A1Q96FL8 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SLC47A1Q96FL8 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
SLC47A1Q96FL8 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.43■■□□□ 1.02
SLC47A1Q96FL8 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
SLC47A1Q96FL8 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.43■■□□□ 1.02
SLC47A1Q96FL8 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
SLC47A1Q96FL8 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.43■■□□□ 1.02
SLC47A1Q96FL8 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
SLC47A1Q96FL8 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
SLC47A1Q96FL8 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SLC47A1Q96FL8 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
SLC47A1Q96FL8 DUSP8P3-201ENST00000399571 1760 ntBASIC21.43■■□□□ 1.02
SLC47A1Q96FL8 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SLC47A1Q96FL8 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
SLC47A1Q96FL8 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
SLC47A1Q96FL8 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
SLC47A1Q96FL8 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
SLC47A1Q96FL8 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SLC47A1Q96FL8 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
SLC47A1Q96FL8 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
SLC47A1Q96FL8 AC092068.2-201ENST00000590491 1708 ntBASIC21.42■■□□□ 1.02
SLC47A1Q96FL8 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms