Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ECHDC3Q96DC8 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ECHDC3Q96DC8 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
ECHDC3Q96DC8 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
ECHDC3Q96DC8 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
ECHDC3Q96DC8 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ECHDC3Q96DC8 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.28
ECHDC3Q96DC8 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
ECHDC3Q96DC8 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
ECHDC3Q96DC8 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
ECHDC3Q96DC8 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.02■■□□□ 1.28
ECHDC3Q96DC8 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.02■■□□□ 1.28
ECHDC3Q96DC8 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
ECHDC3Q96DC8 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
ECHDC3Q96DC8 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
ECHDC3Q96DC8 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
ECHDC3Q96DC8 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
ECHDC3Q96DC8 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC23.01■■□□□ 1.27
ECHDC3Q96DC8 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC23.01■■□□□ 1.27
ECHDC3Q96DC8 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
ECHDC3Q96DC8 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC23.01■■□□□ 1.27
ECHDC3Q96DC8 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC23.01■■□□□ 1.27
ECHDC3Q96DC8 AC005703.6-201ENST00000623265 1329 ntBASIC23.01■■□□□ 1.27
ECHDC3Q96DC8 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
ECHDC3Q96DC8 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC23■■□□□ 1.27
ECHDC3Q96DC8 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
ECHDC3Q96DC8 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC23■■□□□ 1.27
ECHDC3Q96DC8 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC23■■□□□ 1.27
ECHDC3Q96DC8 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23■■□□□ 1.27
ECHDC3Q96DC8 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC23■■□□□ 1.27
ECHDC3Q96DC8 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
ECHDC3Q96DC8 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
ECHDC3Q96DC8 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
ECHDC3Q96DC8 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
ECHDC3Q96DC8 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
ECHDC3Q96DC8 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC22.99■■□□□ 1.27
ECHDC3Q96DC8 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC22.99■■□□□ 1.27
ECHDC3Q96DC8 ALDH1A3-203ENST00000557963 1670 ntBASIC22.99■■□□□ 1.27
ECHDC3Q96DC8 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
ECHDC3Q96DC8 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC22.99■■□□□ 1.27
ECHDC3Q96DC8 PREB-202ENST00000406567 1910 ntTSL 5 BASIC22.98■■□□□ 1.27
ECHDC3Q96DC8 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
ECHDC3Q96DC8 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
ECHDC3Q96DC8 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC22.98■■□□□ 1.27
ECHDC3Q96DC8 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC22.98■■□□□ 1.27
ECHDC3Q96DC8 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
ECHDC3Q96DC8 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC22.97■■□□□ 1.27
ECHDC3Q96DC8 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC22.97■■□□□ 1.27
ECHDC3Q96DC8 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC22.97■■□□□ 1.27
ECHDC3Q96DC8 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
ECHDC3Q96DC8 AL356740.2-201ENST00000601559 647 ntBASIC22.97■■□□□ 1.27
ECHDC3Q96DC8 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
ECHDC3Q96DC8 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
ECHDC3Q96DC8 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
ECHDC3Q96DC8 EI24-204ENST00000527235 1625 ntTSL 5 BASIC22.97■■□□□ 1.27
ECHDC3Q96DC8 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
ECHDC3Q96DC8 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC22.96■■□□□ 1.27
ECHDC3Q96DC8 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC22.96■■□□□ 1.27
ECHDC3Q96DC8 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
ECHDC3Q96DC8 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
ECHDC3Q96DC8 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC22.96■■□□□ 1.27
ECHDC3Q96DC8 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
ECHDC3Q96DC8 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
ECHDC3Q96DC8 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
ECHDC3Q96DC8 RPP21-222ENST00000433076 577 ntTSL 2 BASIC22.95■■□□□ 1.26
ECHDC3Q96DC8 AK3-203ENST00000447596 705 ntTSL 2 BASIC22.95■■□□□ 1.26
ECHDC3Q96DC8 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC22.95■■□□□ 1.26
ECHDC3Q96DC8 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC22.95■■□□□ 1.26
ECHDC3Q96DC8 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC22.95■■□□□ 1.26
ECHDC3Q96DC8 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC22.94■■□□□ 1.26
ECHDC3Q96DC8 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC22.94■■□□□ 1.26
ECHDC3Q96DC8 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC22.94■■□□□ 1.26
ECHDC3Q96DC8 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
ECHDC3Q96DC8 SRR-208ENST00000576848 588 ntTSL 4 BASIC22.94■■□□□ 1.26
ECHDC3Q96DC8 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC22.94■■□□□ 1.26
ECHDC3Q96DC8 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC22.94■■□□□ 1.26
ECHDC3Q96DC8 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC22.94■■□□□ 1.26
ECHDC3Q96DC8 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
ECHDC3Q96DC8 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
ECHDC3Q96DC8 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
ECHDC3Q96DC8 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
ECHDC3Q96DC8 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
ECHDC3Q96DC8 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC22.93■■□□□ 1.26
ECHDC3Q96DC8 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC22.93■■□□□ 1.26
ECHDC3Q96DC8 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC22.93■■□□□ 1.26
ECHDC3Q96DC8 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
ECHDC3Q96DC8 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
ECHDC3Q96DC8 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC22.92■■□□□ 1.26
ECHDC3Q96DC8 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
ECHDC3Q96DC8 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
ECHDC3Q96DC8 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
ECHDC3Q96DC8 SHD-204ENST00000599689 1729 ntTSL 5 BASIC22.92■■□□□ 1.26
ECHDC3Q96DC8 EI24-213ENST00000618552 1747 ntTSL 5 BASIC22.92■■□□□ 1.26
ECHDC3Q96DC8 QDPR-206ENST00000508623 601 ntTSL 3 BASIC22.92■■□□□ 1.26
ECHDC3Q96DC8 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC22.92■■□□□ 1.26
ECHDC3Q96DC8 AC131281.2-201ENST00000520478 145 ntBASIC22.92■■□□□ 1.26
ECHDC3Q96DC8 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC22.92■■□□□ 1.26
ECHDC3Q96DC8 AL512631.2-201ENST00000604634 923 ntBASIC22.92■■□□□ 1.26
ECHDC3Q96DC8 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC22.92■■□□□ 1.26
ECHDC3Q96DC8 RASSF1-AS1-201ENST00000629828 790 ntBASIC22.92■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms