Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC22.03■■□□□ 1.12
NCLNQ969V3 AC103724.3-201ENST00000564481 992 ntBASIC22.03■■□□□ 1.12
NCLNQ969V3 MIR6089-201ENST00000616698 64 ntBASIC22.03■■□□□ 1.12
NCLNQ969V3 ABCB10P4-201ENST00000566803 2184 ntBASIC22.03■■□□□ 1.12
NCLNQ969V3 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
NCLNQ969V3 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC22.03■■□□□ 1.12
NCLNQ969V3 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
NCLNQ969V3 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
NCLNQ969V3 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
NCLNQ969V3 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC22.02■■□□□ 1.12
NCLNQ969V3 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
NCLNQ969V3 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
NCLNQ969V3 AL592295.1-201ENST00000400984 884 ntBASIC22.02■■□□□ 1.12
NCLNQ969V3 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC22.02■■□□□ 1.12
NCLNQ969V3 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC22.02■■□□□ 1.12
NCLNQ969V3 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC22.02■■□□□ 1.12
NCLNQ969V3 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC22.02■■□□□ 1.12
NCLNQ969V3 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
NCLNQ969V3 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
NCLNQ969V3 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC22.02■■□□□ 1.12
NCLNQ969V3 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC22.02■■□□□ 1.12
NCLNQ969V3 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
NCLNQ969V3 LSR-205ENST00000427250 1606 ntTSL 2 BASIC22.02■■□□□ 1.11
NCLNQ969V3 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC22.02■■□□□ 1.11
NCLNQ969V3 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC22.02■■□□□ 1.11
NCLNQ969V3 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.11
NCLNQ969V3 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
NCLNQ969V3 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC22.01■■□□□ 1.11
NCLNQ969V3 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
NCLNQ969V3 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
NCLNQ969V3 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
NCLNQ969V3 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
NCLNQ969V3 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
NCLNQ969V3 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
NCLNQ969V3 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
NCLNQ969V3 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
NCLNQ969V3 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC22.01■■□□□ 1.11
NCLNQ969V3 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
NCLNQ969V3 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
NCLNQ969V3 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC22■■□□□ 1.11
NCLNQ969V3 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC22■■□□□ 1.11
NCLNQ969V3 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC22■■□□□ 1.11
NCLNQ969V3 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
NCLNQ969V3 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
NCLNQ969V3 AL451085.2-201ENST00000605085 799 ntBASIC22■■□□□ 1.11
NCLNQ969V3 AL031848.2-201ENST00000607670 837 ntBASIC22■■□□□ 1.11
NCLNQ969V3 DUSP8P5-201ENST00000422884 1815 ntBASIC22■■□□□ 1.11
NCLNQ969V3 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC22■■□□□ 1.11
NCLNQ969V3 FOXO3B-201ENST00000395675 1928 ntBASIC22■■□□□ 1.11
NCLNQ969V3 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
NCLNQ969V3 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC22■■□□□ 1.11
NCLNQ969V3 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
NCLNQ969V3 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.99■■□□□ 1.11
NCLNQ969V3 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.99■■□□□ 1.11
NCLNQ969V3 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
NCLNQ969V3 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
NCLNQ969V3 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
NCLNQ969V3 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
NCLNQ969V3 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.99■■□□□ 1.11
NCLNQ969V3 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
NCLNQ969V3 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.98■■□□□ 1.11
NCLNQ969V3 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
NCLNQ969V3 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
NCLNQ969V3 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
NCLNQ969V3 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.98■■□□□ 1.11
NCLNQ969V3 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
NCLNQ969V3 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
NCLNQ969V3 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
NCLNQ969V3 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.98■■□□□ 1.11
NCLNQ969V3 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
NCLNQ969V3 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.98■■□□□ 1.11
NCLNQ969V3 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NCLNQ969V3 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
NCLNQ969V3 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.97■■□□□ 1.11
NCLNQ969V3 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.97■■□□□ 1.11
NCLNQ969V3 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
NCLNQ969V3 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
NCLNQ969V3 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NCLNQ969V3 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
NCLNQ969V3 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NCLNQ969V3 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NCLNQ969V3 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.96■■□□□ 1.11
NCLNQ969V3 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
NCLNQ969V3 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.96■■□□□ 1.11
NCLNQ969V3 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.11
NCLNQ969V3 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
NCLNQ969V3 PKD1P6-201ENST00000343738 4769 ntBASIC21.95■■□□□ 1.1
NCLNQ969V3 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NCLNQ969V3 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NCLNQ969V3 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
NCLNQ969V3 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NCLNQ969V3 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
NCLNQ969V3 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
NCLNQ969V3 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
NCLNQ969V3 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.94■■□□□ 1.1
NCLNQ969V3 THA1P-201ENST00000590384 1145 ntBASIC21.94■■□□□ 1.1
NCLNQ969V3 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
NCLNQ969V3 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NCLNQ969V3 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.94■■□□□ 1.1
NCLNQ969V3 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms