Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMEM54Q969K7 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.23■□□□□ 0.83
TMEM54Q969K7 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.23■□□□□ 0.83
TMEM54Q969K7 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TMEM54Q969K7 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMEM54Q969K7 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
TMEM54Q969K7 AC009299.2-201ENST00000482477 511 ntBASIC20.23■□□□□ 0.83
TMEM54Q969K7 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.23■□□□□ 0.83
TMEM54Q969K7 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMEM54Q969K7 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMEM54Q969K7 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.23■□□□□ 0.83
TMEM54Q969K7 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TMEM54Q969K7 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
TMEM54Q969K7 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TMEM54Q969K7 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.22■□□□□ 0.83
TMEM54Q969K7 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TMEM54Q969K7 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.22■□□□□ 0.83
TMEM54Q969K7 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
TMEM54Q969K7 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.22■□□□□ 0.83
TMEM54Q969K7 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.22■□□□□ 0.83
TMEM54Q969K7 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TMEM54Q969K7 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TMEM54Q969K7 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
TMEM54Q969K7 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
TMEM54Q969K7 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMEM54Q969K7 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.21■□□□□ 0.83
TMEM54Q969K7 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMEM54Q969K7 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
TMEM54Q969K7 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.2■□□□□ 0.82
TMEM54Q969K7 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.2■□□□□ 0.82
TMEM54Q969K7 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
TMEM54Q969K7 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.2■□□□□ 0.82
TMEM54Q969K7 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TMEM54Q969K7 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TMEM54Q969K7 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
TMEM54Q969K7 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TMEM54Q969K7 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
TMEM54Q969K7 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TMEM54Q969K7 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
TMEM54Q969K7 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.19■□□□□ 0.82
TMEM54Q969K7 KRT125P-201ENST00000546827 989 ntBASIC20.19■□□□□ 0.82
TMEM54Q969K7 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.19■□□□□ 0.82
TMEM54Q969K7 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
TMEM54Q969K7 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.19■□□□□ 0.82
TMEM54Q969K7 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.19■□□□□ 0.82
TMEM54Q969K7 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM54Q969K7 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM54Q969K7 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM54Q969K7 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM54Q969K7 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM54Q969K7 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM54Q969K7 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.18■□□□□ 0.82
TMEM54Q969K7 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.18■□□□□ 0.82
TMEM54Q969K7 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM54Q969K7 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM54Q969K7 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.18■□□□□ 0.82
TMEM54Q969K7 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM54Q969K7 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM54Q969K7 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM54Q969K7 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.18■□□□□ 0.82
TMEM54Q969K7 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
TMEM54Q969K7 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
TMEM54Q969K7 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
TMEM54Q969K7 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TMEM54Q969K7 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.17■□□□□ 0.82
TMEM54Q969K7 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.17■□□□□ 0.82
TMEM54Q969K7 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TMEM54Q969K7 AC239859.2-201ENST00000444165 318 ntBASIC20.17■□□□□ 0.82
TMEM54Q969K7 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.17■□□□□ 0.82
TMEM54Q969K7 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.17■□□□□ 0.82
TMEM54Q969K7 AC092028.1-203ENST00000608262 953 ntBASIC20.17■□□□□ 0.82
TMEM54Q969K7 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TMEM54Q969K7 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
TMEM54Q969K7 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TMEM54Q969K7 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
TMEM54Q969K7 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TMEM54Q969K7 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TMEM54Q969K7 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
TMEM54Q969K7 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.16■□□□□ 0.82
TMEM54Q969K7 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TMEM54Q969K7 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.16■□□□□ 0.82
TMEM54Q969K7 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.16■□□□□ 0.82
TMEM54Q969K7 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TMEM54Q969K7 MIR4787-201ENST00000607364 84 ntBASIC20.16■□□□□ 0.82
TMEM54Q969K7 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TMEM54Q969K7 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.16■□□□□ 0.82
TMEM54Q969K7 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.16■□□□□ 0.82
TMEM54Q969K7 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.16■□□□□ 0.82
TMEM54Q969K7 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TMEM54Q969K7 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TMEM54Q969K7 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TMEM54Q969K7 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TMEM54Q969K7 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
TMEM54Q969K7 MIR6722-201ENST00000617286 78 ntBASIC20.15■□□□□ 0.82
TMEM54Q969K7 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.15■□□□□ 0.82
TMEM54Q969K7 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.15■□□□□ 0.82
TMEM54Q969K7 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TMEM54Q969K7 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.82
TMEM54Q969K7 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
TMEM54Q969K7 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms