Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CNOT9Q92600 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.06■□□□□ 0.96
CNOT9Q92600 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CNOT9Q92600 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CNOT9Q92600 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.06■□□□□ 0.96
CNOT9Q92600 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
CNOT9Q92600 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.06■□□□□ 0.96
CNOT9Q92600 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CNOT9Q92600 YBX1P4-201ENST00000392794 808 ntBASIC21.05■□□□□ 0.96
CNOT9Q92600 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.05■□□□□ 0.96
CNOT9Q92600 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.05■□□□□ 0.96
CNOT9Q92600 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.05■□□□□ 0.96
CNOT9Q92600 AC103724.3-201ENST00000564481 992 ntBASIC21.05■□□□□ 0.96
CNOT9Q92600 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.05■□□□□ 0.96
CNOT9Q92600 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CNOT9Q92600 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.05■□□□□ 0.96
CNOT9Q92600 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CNOT9Q92600 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CNOT9Q92600 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.04■□□□□ 0.96
CNOT9Q92600 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.04■□□□□ 0.96
CNOT9Q92600 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.04■□□□□ 0.96
CNOT9Q92600 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.04■□□□□ 0.96
CNOT9Q92600 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CNOT9Q92600 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CNOT9Q92600 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CNOT9Q92600 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CNOT9Q92600 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.03■□□□□ 0.96
CNOT9Q92600 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CNOT9Q92600 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
CNOT9Q92600 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CNOT9Q92600 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CNOT9Q92600 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.03■□□□□ 0.96
CNOT9Q92600 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CNOT9Q92600 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
CNOT9Q92600 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CNOT9Q92600 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CNOT9Q92600 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CNOT9Q92600 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.02■□□□□ 0.96
CNOT9Q92600 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.02■□□□□ 0.96
CNOT9Q92600 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CNOT9Q92600 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CNOT9Q92600 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CNOT9Q92600 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNOT9Q92600 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CNOT9Q92600 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CNOT9Q92600 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNOT9Q92600 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CNOT9Q92600 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.01■□□□□ 0.95
CNOT9Q92600 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CNOT9Q92600 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.01■□□□□ 0.95
CNOT9Q92600 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.01■□□□□ 0.95
CNOT9Q92600 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.01■□□□□ 0.95
CNOT9Q92600 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.01■□□□□ 0.95
CNOT9Q92600 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.01■□□□□ 0.95
CNOT9Q92600 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNOT9Q92600 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNOT9Q92600 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CNOT9Q92600 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CNOT9Q92600 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CNOT9Q92600 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21■□□□□ 0.95
CNOT9Q92600 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21■□□□□ 0.95
CNOT9Q92600 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21■□□□□ 0.95
CNOT9Q92600 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21■□□□□ 0.95
CNOT9Q92600 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CNOT9Q92600 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CNOT9Q92600 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CNOT9Q92600 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CNOT9Q92600 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CNOT9Q92600 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CNOT9Q92600 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.99■□□□□ 0.95
CNOT9Q92600 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CNOT9Q92600 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CNOT9Q92600 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CNOT9Q92600 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CNOT9Q92600 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CNOT9Q92600 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CNOT9Q92600 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CNOT9Q92600 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.98■□□□□ 0.95
CNOT9Q92600 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CNOT9Q92600 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CNOT9Q92600 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNOT9Q92600 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CNOT9Q92600 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNOT9Q92600 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNOT9Q92600 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.97■□□□□ 0.95
CNOT9Q92600 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNOT9Q92600 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CNOT9Q92600 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNOT9Q92600 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNOT9Q92600 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CNOT9Q92600 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNOT9Q92600 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNOT9Q92600 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CNOT9Q92600 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CNOT9Q92600 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.96■□□□□ 0.95
CNOT9Q92600 AL031848.2-201ENST00000607670 837 ntBASIC20.96■□□□□ 0.95
CNOT9Q92600 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNOT9Q92600 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNOT9Q92600 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNOT9Q92600 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms