Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
SH3RF2Q8TEC5 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SH3RF2Q8TEC5 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SH3RF2Q8TEC5 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SH3RF2Q8TEC5 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SH3RF2Q8TEC5 UNC93B3-201ENST00000308076 687 ntBASIC23.82■■□□□ 1.4
SH3RF2Q8TEC5 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC23.82■■□□□ 1.4
SH3RF2Q8TEC5 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SH3RF2Q8TEC5 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SH3RF2Q8TEC5 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SH3RF2Q8TEC5 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SH3RF2Q8TEC5 GATM-206ENST00000558336 1522 ntTSL 2 BASIC23.81■■□□□ 1.4
SH3RF2Q8TEC5 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SH3RF2Q8TEC5 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SH3RF2Q8TEC5 AC106739.1-201ENST00000617035 715 ntBASIC23.81■■□□□ 1.4
SH3RF2Q8TEC5 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.81■■□□□ 1.4
SH3RF2Q8TEC5 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SH3RF2Q8TEC5 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
SH3RF2Q8TEC5 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SH3RF2Q8TEC5 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
SH3RF2Q8TEC5 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
SH3RF2Q8TEC5 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
SH3RF2Q8TEC5 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SH3RF2Q8TEC5 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC23.8■■□□□ 1.4
SH3RF2Q8TEC5 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SH3RF2Q8TEC5 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
SH3RF2Q8TEC5 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SH3RF2Q8TEC5 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
SH3RF2Q8TEC5 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
SH3RF2Q8TEC5 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
SH3RF2Q8TEC5 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SH3RF2Q8TEC5 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC23.78■■□□□ 1.4
SH3RF2Q8TEC5 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
SH3RF2Q8TEC5 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SH3RF2Q8TEC5 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC23.78■■□□□ 1.4
SH3RF2Q8TEC5 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SH3RF2Q8TEC5 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC23.78■■□□□ 1.4
SH3RF2Q8TEC5 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SH3RF2Q8TEC5 AL136162.1-201ENST00000607711 1078 ntBASIC23.78■■□□□ 1.4
SH3RF2Q8TEC5 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
SH3RF2Q8TEC5 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SH3RF2Q8TEC5 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC23.78■■□□□ 1.4
SH3RF2Q8TEC5 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC23.77■■□□□ 1.4
SH3RF2Q8TEC5 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
SH3RF2Q8TEC5 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
SH3RF2Q8TEC5 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC23.77■■□□□ 1.4
SH3RF2Q8TEC5 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC23.77■■□□□ 1.4
SH3RF2Q8TEC5 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SH3RF2Q8TEC5 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC23.77■■□□□ 1.4
SH3RF2Q8TEC5 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
SH3RF2Q8TEC5 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SH3RF2Q8TEC5 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SH3RF2Q8TEC5 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SH3RF2Q8TEC5 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SH3RF2Q8TEC5 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC23.76■■□□□ 1.39
SH3RF2Q8TEC5 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SH3RF2Q8TEC5 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC23.76■■□□□ 1.39
SH3RF2Q8TEC5 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
SH3RF2Q8TEC5 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SH3RF2Q8TEC5 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SH3RF2Q8TEC5 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC23.76■■□□□ 1.39
SH3RF2Q8TEC5 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SH3RF2Q8TEC5 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SH3RF2Q8TEC5 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SH3RF2Q8TEC5 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SH3RF2Q8TEC5 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC23.75■■□□□ 1.39
SH3RF2Q8TEC5 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SH3RF2Q8TEC5 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SH3RF2Q8TEC5 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC23.75■■□□□ 1.39
SH3RF2Q8TEC5 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SH3RF2Q8TEC5 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SH3RF2Q8TEC5 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SH3RF2Q8TEC5 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SH3RF2Q8TEC5 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
SH3RF2Q8TEC5 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SH3RF2Q8TEC5 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.74■■□□□ 1.39
SH3RF2Q8TEC5 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.74■■□□□ 1.39
SH3RF2Q8TEC5 HLA-L-211ENST00000482052 1765 ntBASIC23.74■■□□□ 1.39
SH3RF2Q8TEC5 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
SH3RF2Q8TEC5 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC23.74■■□□□ 1.39
SH3RF2Q8TEC5 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC23.74■■□□□ 1.39
SH3RF2Q8TEC5 AC135279.3-201ENST00000610945 1311 ntBASIC23.74■■□□□ 1.39
SH3RF2Q8TEC5 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.74■■□□□ 1.39
SH3RF2Q8TEC5 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SH3RF2Q8TEC5 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SH3RF2Q8TEC5 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SH3RF2Q8TEC5 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
SH3RF2Q8TEC5 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
SH3RF2Q8TEC5 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
SH3RF2Q8TEC5 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
SH3RF2Q8TEC5 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC23.73■■□□□ 1.39
SH3RF2Q8TEC5 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SH3RF2Q8TEC5 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC23.73■■□□□ 1.39
SH3RF2Q8TEC5 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC23.73■■□□□ 1.39
SH3RF2Q8TEC5 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC23.73■■□□□ 1.39
SH3RF2Q8TEC5 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SH3RF2Q8TEC5 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SH3RF2Q8TEC5 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SH3RF2Q8TEC5 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC23.72■■□□□ 1.39
SH3RF2Q8TEC5 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC23.72■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms