Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
CLDND2Q8NHS1 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CLDND2Q8NHS1 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLDND2Q8NHS1 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.39■□□□□ 0.69
CLDND2Q8NHS1 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CLDND2Q8NHS1 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CLDND2Q8NHS1 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.39■□□□□ 0.69
CLDND2Q8NHS1 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.39■□□□□ 0.69
CLDND2Q8NHS1 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.39■□□□□ 0.69
CLDND2Q8NHS1 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CLDND2Q8NHS1 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CLDND2Q8NHS1 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLDND2Q8NHS1 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLDND2Q8NHS1 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLDND2Q8NHS1 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLDND2Q8NHS1 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.38■□□□□ 0.69
CLDND2Q8NHS1 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC19.38■□□□□ 0.69
CLDND2Q8NHS1 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLDND2Q8NHS1 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.38■□□□□ 0.69
CLDND2Q8NHS1 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CLDND2Q8NHS1 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CLDND2Q8NHS1 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.37■□□□□ 0.69
CLDND2Q8NHS1 AL139125.2-201ENST00000623134 1869 ntBASIC19.37■□□□□ 0.69
CLDND2Q8NHS1 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLDND2Q8NHS1 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.37■□□□□ 0.69
CLDND2Q8NHS1 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.37■□□□□ 0.69
CLDND2Q8NHS1 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLDND2Q8NHS1 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.37■□□□□ 0.69
CLDND2Q8NHS1 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLDND2Q8NHS1 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLDND2Q8NHS1 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.37■□□□□ 0.69
CLDND2Q8NHS1 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLDND2Q8NHS1 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLDND2Q8NHS1 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.37■□□□□ 0.69
CLDND2Q8NHS1 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
CLDND2Q8NHS1 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CLDND2Q8NHS1 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CLDND2Q8NHS1 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLDND2Q8NHS1 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CLDND2Q8NHS1 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLDND2Q8NHS1 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.36■□□□□ 0.69
CLDND2Q8NHS1 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CLDND2Q8NHS1 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLDND2Q8NHS1 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLDND2Q8NHS1 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLDND2Q8NHS1 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLDND2Q8NHS1 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.35■□□□□ 0.69
CLDND2Q8NHS1 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.35■□□□□ 0.69
CLDND2Q8NHS1 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLDND2Q8NHS1 MIR6722-201ENST00000617286 78 ntBASIC19.35■□□□□ 0.69
CLDND2Q8NHS1 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLDND2Q8NHS1 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLDND2Q8NHS1 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CLDND2Q8NHS1 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLDND2Q8NHS1 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLDND2Q8NHS1 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
CLDND2Q8NHS1 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLDND2Q8NHS1 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLDND2Q8NHS1 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
CLDND2Q8NHS1 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLDND2Q8NHS1 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CLDND2Q8NHS1 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.34■□□□□ 0.69
CLDND2Q8NHS1 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.34■□□□□ 0.69
CLDND2Q8NHS1 MIR4466-201ENST00000606121 54 ntBASIC19.34■□□□□ 0.69
CLDND2Q8NHS1 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLDND2Q8NHS1 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLDND2Q8NHS1 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.34■□□□□ 0.69
CLDND2Q8NHS1 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.34■□□□□ 0.69
CLDND2Q8NHS1 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLDND2Q8NHS1 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLDND2Q8NHS1 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.33■□□□□ 0.68
CLDND2Q8NHS1 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.33■□□□□ 0.68
CLDND2Q8NHS1 AL512631.2-201ENST00000604634 923 ntBASIC19.33■□□□□ 0.68
CLDND2Q8NHS1 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLDND2Q8NHS1 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CLDND2Q8NHS1 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLDND2Q8NHS1 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CLDND2Q8NHS1 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.32■□□□□ 0.68
CLDND2Q8NHS1 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDND2Q8NHS1 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDND2Q8NHS1 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDND2Q8NHS1 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.32■□□□□ 0.68
CLDND2Q8NHS1 AL139246.5-201ENST00000606645 996 ntBASIC19.32■□□□□ 0.68
CLDND2Q8NHS1 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.32■□□□□ 0.68
CLDND2Q8NHS1 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDND2Q8NHS1 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CLDND2Q8NHS1 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDND2Q8NHS1 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.32■□□□□ 0.68
CLDND2Q8NHS1 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CLDND2Q8NHS1 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDND2Q8NHS1 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDND2Q8NHS1 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDND2Q8NHS1 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLDND2Q8NHS1 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLDND2Q8NHS1 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
CLDND2Q8NHS1 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.31■□□□□ 0.68
CLDND2Q8NHS1 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.31■□□□□ 0.68
CLDND2Q8NHS1 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLDND2Q8NHS1 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLDND2Q8NHS1 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms