Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
RTL9Q8NET4 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
RTL9Q8NET4 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
RTL9Q8NET4 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
RTL9Q8NET4 HLA-L-211ENST00000482052 1765 ntBASIC28.42■■■□□ 2.14
RTL9Q8NET4 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC28.42■■■□□ 2.14
RTL9Q8NET4 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC28.42■■■□□ 2.14
RTL9Q8NET4 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC28.42■■■□□ 2.14
RTL9Q8NET4 DUX4L19-201ENST00000557448 1267 ntBASIC28.42■■■□□ 2.14
RTL9Q8NET4 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC28.42■■■□□ 2.14
RTL9Q8NET4 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
RTL9Q8NET4 AC009102.2-201ENST00000606772 1639 ntBASIC28.42■■■□□ 2.14
RTL9Q8NET4 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC28.42■■■□□ 2.14
RTL9Q8NET4 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
RTL9Q8NET4 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC28.41■■■□□ 2.14
RTL9Q8NET4 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC28.41■■■□□ 2.14
RTL9Q8NET4 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
RTL9Q8NET4 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
RTL9Q8NET4 EDA-201ENST00000338901 1233 ntBASIC28.41■■■□□ 2.14
RTL9Q8NET4 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC28.41■■■□□ 2.14
RTL9Q8NET4 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
RTL9Q8NET4 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC28.4■■■□□ 2.14
RTL9Q8NET4 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC28.4■■■□□ 2.14
RTL9Q8NET4 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC28.4■■■□□ 2.14
RTL9Q8NET4 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC28.4■■■□□ 2.14
RTL9Q8NET4 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC28.4■■■□□ 2.14
RTL9Q8NET4 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
RTL9Q8NET4 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC28.4■■■□□ 2.14
RTL9Q8NET4 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC28.4■■■□□ 2.14
RTL9Q8NET4 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC28.4■■■□□ 2.14
RTL9Q8NET4 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
RTL9Q8NET4 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC28.39■■■□□ 2.14
RTL9Q8NET4 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC28.39■■■□□ 2.14
RTL9Q8NET4 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
RTL9Q8NET4 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC28.39■■■□□ 2.14
RTL9Q8NET4 C17orf82-201ENST00000623772 1530 ntBASIC28.39■■■□□ 2.14
RTL9Q8NET4 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC28.38■■■□□ 2.13
RTL9Q8NET4 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
RTL9Q8NET4 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
RTL9Q8NET4 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
RTL9Q8NET4 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC28.38■■■□□ 2.13
RTL9Q8NET4 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC28.38■■■□□ 2.13
RTL9Q8NET4 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC28.38■■■□□ 2.13
RTL9Q8NET4 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC28.38■■■□□ 2.13
RTL9Q8NET4 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC28.37■■■□□ 2.13
RTL9Q8NET4 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC28.37■■■□□ 2.13
RTL9Q8NET4 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC28.37■■■□□ 2.13
RTL9Q8NET4 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC28.37■■■□□ 2.13
RTL9Q8NET4 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
RTL9Q8NET4 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
RTL9Q8NET4 AC092171.4-201ENST00000609130 632 ntBASIC28.37■■■□□ 2.13
RTL9Q8NET4 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
RTL9Q8NET4 AC092666.2-201ENST00000613287 246 ntBASIC28.37■■■□□ 2.13
RTL9Q8NET4 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
RTL9Q8NET4 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
RTL9Q8NET4 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
RTL9Q8NET4 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
RTL9Q8NET4 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
RTL9Q8NET4 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC28.36■■■□□ 2.13
RTL9Q8NET4 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
RTL9Q8NET4 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC28.36■■■□□ 2.13
RTL9Q8NET4 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
RTL9Q8NET4 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
RTL9Q8NET4 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC28.36■■■□□ 2.13
RTL9Q8NET4 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC28.35■■■□□ 2.13
RTL9Q8NET4 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
RTL9Q8NET4 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC28.35■■■□□ 2.13
RTL9Q8NET4 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC28.34■■■□□ 2.13
RTL9Q8NET4 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC28.34■■■□□ 2.13
RTL9Q8NET4 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC28.34■■■□□ 2.13
RTL9Q8NET4 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC28.34■■■□□ 2.13
RTL9Q8NET4 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC28.34■■■□□ 2.13
RTL9Q8NET4 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
RTL9Q8NET4 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
RTL9Q8NET4 LGR4-203ENST00000480977 492 ntTSL 2 BASIC28.34■■■□□ 2.13
RTL9Q8NET4 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC28.34■■■□□ 2.13
RTL9Q8NET4 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC28.34■■■□□ 2.13
RTL9Q8NET4 AL355001.2-201ENST00000620617 1191 ntBASIC28.34■■■□□ 2.13
RTL9Q8NET4 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
RTL9Q8NET4 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC28.34■■■□□ 2.13
RTL9Q8NET4 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
RTL9Q8NET4 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC28.33■■■□□ 2.13
RTL9Q8NET4 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC28.33■■■□□ 2.13
RTL9Q8NET4 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC28.33■■■□□ 2.13
RTL9Q8NET4 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.13
RTL9Q8NET4 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC28.33■■■□□ 2.13
RTL9Q8NET4 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC28.33■■■□□ 2.13
RTL9Q8NET4 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC28.33■■■□□ 2.13
RTL9Q8NET4 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC28.33■■■□□ 2.13
RTL9Q8NET4 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC28.33■■■□□ 2.13
RTL9Q8NET4 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
RTL9Q8NET4 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
RTL9Q8NET4 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
RTL9Q8NET4 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
RTL9Q8NET4 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
RTL9Q8NET4 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
RTL9Q8NET4 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC28.32■■■□□ 2.12
RTL9Q8NET4 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
RTL9Q8NET4 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC28.32■■■□□ 2.12
RTL9Q8NET4 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms