Protein–RNA interactions for Protein: Q8NDX1

PSD4, PH and SEC7 domain-containing protein 4, humanhuman

Predictions only

Length 1,056 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSD4Q8NDX1 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.44■■□□□ 1.02
PSD4Q8NDX1 AP003733.4-201ENST00000623785 1697 ntBASIC21.44■■□□□ 1.02
PSD4Q8NDX1 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.43■■□□□ 1.02
PSD4Q8NDX1 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
PSD4Q8NDX1 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PSD4Q8NDX1 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.43■■□□□ 1.02
PSD4Q8NDX1 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PSD4Q8NDX1 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.43■■□□□ 1.02
PSD4Q8NDX1 TSPY9P-201ENST00000440215 945 ntBASIC21.43■■□□□ 1.02
PSD4Q8NDX1 TSPY11P-201ENST00000442607 1045 ntBASIC21.43■■□□□ 1.02
PSD4Q8NDX1 AC092028.1-203ENST00000608262 953 ntBASIC21.43■■□□□ 1.02
PSD4Q8NDX1 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.43■■□□□ 1.02
PSD4Q8NDX1 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PSD4Q8NDX1 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PSD4Q8NDX1 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PSD4Q8NDX1 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
PSD4Q8NDX1 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
PSD4Q8NDX1 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PSD4Q8NDX1 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
PSD4Q8NDX1 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PSD4Q8NDX1 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
PSD4Q8NDX1 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PSD4Q8NDX1 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.41■■□□□ 1.02
PSD4Q8NDX1 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
PSD4Q8NDX1 AF131216.4-201ENST00000638924 1588 ntBASIC21.41■■□□□ 1.02
PSD4Q8NDX1 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PSD4Q8NDX1 KRT16P3-201ENST00000439127 1283 ntBASIC21.41■■□□□ 1.02
PSD4Q8NDX1 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.41■■□□□ 1.02
PSD4Q8NDX1 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
PSD4Q8NDX1 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.41■■□□□ 1.02
PSD4Q8NDX1 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PSD4Q8NDX1 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PSD4Q8NDX1 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PSD4Q8NDX1 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
PSD4Q8NDX1 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PSD4Q8NDX1 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
PSD4Q8NDX1 AC079834.2-201ENST00000609776 1949 ntBASIC21.4■■□□□ 1.02
PSD4Q8NDX1 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.4■■□□□ 1.02
PSD4Q8NDX1 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.4■■□□□ 1.02
PSD4Q8NDX1 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
PSD4Q8NDX1 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.4■■□□□ 1.02
PSD4Q8NDX1 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PSD4Q8NDX1 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PSD4Q8NDX1 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PSD4Q8NDX1 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PSD4Q8NDX1 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
PSD4Q8NDX1 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.39■■□□□ 1.01
PSD4Q8NDX1 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.39■■□□□ 1.01
PSD4Q8NDX1 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.39■■□□□ 1.01
PSD4Q8NDX1 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PSD4Q8NDX1 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PSD4Q8NDX1 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PSD4Q8NDX1 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
PSD4Q8NDX1 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.39■■□□□ 1.01
PSD4Q8NDX1 LINC01124-201ENST00000409786 2117 ntBASIC21.38■■□□□ 1.01
PSD4Q8NDX1 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PSD4Q8NDX1 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
PSD4Q8NDX1 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PSD4Q8NDX1 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.38■■□□□ 1.01
PSD4Q8NDX1 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.38■■□□□ 1.01
PSD4Q8NDX1 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PSD4Q8NDX1 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.38■■□□□ 1.01
PSD4Q8NDX1 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PSD4Q8NDX1 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.38■■□□□ 1.01
PSD4Q8NDX1 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PSD4Q8NDX1 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
PSD4Q8NDX1 SLC6A10P-202ENST00000431994 2058 ntBASIC21.37■■□□□ 1.01
PSD4Q8NDX1 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PSD4Q8NDX1 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.37■■□□□ 1.01
PSD4Q8NDX1 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.37■■□□□ 1.01
PSD4Q8NDX1 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.37■■□□□ 1.01
PSD4Q8NDX1 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.37■■□□□ 1.01
PSD4Q8NDX1 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PSD4Q8NDX1 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PSD4Q8NDX1 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PSD4Q8NDX1 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PSD4Q8NDX1 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PSD4Q8NDX1 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PSD4Q8NDX1 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PSD4Q8NDX1 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PSD4Q8NDX1 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PSD4Q8NDX1 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.36■■□□□ 1.01
PSD4Q8NDX1 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.36■■□□□ 1.01
PSD4Q8NDX1 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
PSD4Q8NDX1 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.36■■□□□ 1.01
PSD4Q8NDX1 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
PSD4Q8NDX1 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.35■■□□□ 1.01
PSD4Q8NDX1 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PSD4Q8NDX1 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PSD4Q8NDX1 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
PSD4Q8NDX1 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PSD4Q8NDX1 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.35■■□□□ 1.01
PSD4Q8NDX1 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PSD4Q8NDX1 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PSD4Q8NDX1 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
PSD4Q8NDX1 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
PSD4Q8NDX1 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.34■■□□□ 1.01
PSD4Q8NDX1 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PSD4Q8NDX1 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PSD4Q8NDX1 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms