Protein–RNA interactions for Protein: Q8NCR6

SMRP1, Spermatid-specific manchette-related protein 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMRP1Q8NCR6 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SMRP1Q8NCR6 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SMRP1Q8NCR6 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SMRP1Q8NCR6 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC24■■□□□ 1.43
SMRP1Q8NCR6 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC24■■□□□ 1.43
SMRP1Q8NCR6 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC24■■□□□ 1.43
SMRP1Q8NCR6 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SMRP1Q8NCR6 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SMRP1Q8NCR6 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SMRP1Q8NCR6 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SMRP1Q8NCR6 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
SMRP1Q8NCR6 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SMRP1Q8NCR6 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC23.99■■□□□ 1.43
SMRP1Q8NCR6 RAB43-208ENST00000615093 783 ntTSL 5 BASIC23.99■■□□□ 1.43
SMRP1Q8NCR6 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC23.99■■□□□ 1.43
SMRP1Q8NCR6 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
SMRP1Q8NCR6 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.98■■□□□ 1.43
SMRP1Q8NCR6 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
SMRP1Q8NCR6 AC004911.1-201ENST00000416316 871 ntBASIC23.98■■□□□ 1.43
SMRP1Q8NCR6 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC23.98■■□□□ 1.43
SMRP1Q8NCR6 AC009086.3-201ENST00000623486 1008 ntBASIC23.98■■□□□ 1.43
SMRP1Q8NCR6 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SMRP1Q8NCR6 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SMRP1Q8NCR6 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
SMRP1Q8NCR6 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
SMRP1Q8NCR6 ERN1-208ENST00000606895 2068 ntBASIC23.98■■□□□ 1.43
SMRP1Q8NCR6 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
SMRP1Q8NCR6 NME4-202ENST00000382940 766 ntTSL 3 BASIC23.97■■□□□ 1.43
SMRP1Q8NCR6 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC23.97■■□□□ 1.43
SMRP1Q8NCR6 DLX3-202ENST00000512495 834 ntTSL 2 BASIC23.97■■□□□ 1.43
SMRP1Q8NCR6 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC23.97■■□□□ 1.43
SMRP1Q8NCR6 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
SMRP1Q8NCR6 NME4-211ENST00000620944 1193 ntTSL 2 BASIC23.97■■□□□ 1.43
SMRP1Q8NCR6 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC23.96■■□□□ 1.43
SMRP1Q8NCR6 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC23.96■■□□□ 1.43
SMRP1Q8NCR6 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
SMRP1Q8NCR6 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
SMRP1Q8NCR6 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
SMRP1Q8NCR6 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.96■■□□□ 1.43
SMRP1Q8NCR6 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
SMRP1Q8NCR6 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC23.95■■□□□ 1.42
SMRP1Q8NCR6 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
SMRP1Q8NCR6 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
SMRP1Q8NCR6 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
SMRP1Q8NCR6 AC027612.3-201ENST00000413684 1047 ntBASIC23.95■■□□□ 1.42
SMRP1Q8NCR6 DENND3-207ENST00000518347 850 ntTSL 2 BASIC23.95■■□□□ 1.42
SMRP1Q8NCR6 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC23.95■■□□□ 1.42
SMRP1Q8NCR6 AC126544.1-201ENST00000580842 1059 ntBASIC23.95■■□□□ 1.42
SMRP1Q8NCR6 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC23.95■■□□□ 1.42
SMRP1Q8NCR6 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC23.95■■□□□ 1.42
SMRP1Q8NCR6 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
SMRP1Q8NCR6 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC23.95■■□□□ 1.42
SMRP1Q8NCR6 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
SMRP1Q8NCR6 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC23.94■■□□□ 1.42
SMRP1Q8NCR6 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC23.94■■□□□ 1.42
SMRP1Q8NCR6 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC23.94■■□□□ 1.42
SMRP1Q8NCR6 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC23.94■■□□□ 1.42
SMRP1Q8NCR6 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SMRP1Q8NCR6 AC123595.1-201ENST00000440769 1046 ntBASIC23.94■■□□□ 1.42
SMRP1Q8NCR6 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
SMRP1Q8NCR6 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
SMRP1Q8NCR6 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SMRP1Q8NCR6 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
SMRP1Q8NCR6 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.94■■□□□ 1.42
SMRP1Q8NCR6 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC23.93■■□□□ 1.42
SMRP1Q8NCR6 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
SMRP1Q8NCR6 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
SMRP1Q8NCR6 AL358852.1-201ENST00000623174 1268 ntBASIC23.93■■□□□ 1.42
SMRP1Q8NCR6 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
SMRP1Q8NCR6 TSPY26P-201ENST00000476365 1326 ntBASIC23.92■■□□□ 1.42
SMRP1Q8NCR6 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
SMRP1Q8NCR6 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
SMRP1Q8NCR6 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC23.92■■□□□ 1.42
SMRP1Q8NCR6 AC142086.6-201ENST00000621154 1765 ntBASIC23.92■■□□□ 1.42
SMRP1Q8NCR6 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC23.92■■□□□ 1.42
SMRP1Q8NCR6 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
SMRP1Q8NCR6 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SMRP1Q8NCR6 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SMRP1Q8NCR6 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC23.91■■□□□ 1.42
SMRP1Q8NCR6 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
SMRP1Q8NCR6 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC23.91■■□□□ 1.42
SMRP1Q8NCR6 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
SMRP1Q8NCR6 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC23.91■■□□□ 1.42
SMRP1Q8NCR6 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
SMRP1Q8NCR6 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SMRP1Q8NCR6 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
SMRP1Q8NCR6 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SMRP1Q8NCR6 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SMRP1Q8NCR6 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC23.9■■□□□ 1.42
SMRP1Q8NCR6 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
SMRP1Q8NCR6 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23.9■■□□□ 1.42
SMRP1Q8NCR6 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC23.9■■□□□ 1.42
SMRP1Q8NCR6 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.42
SMRP1Q8NCR6 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC23.89■■□□□ 1.42
SMRP1Q8NCR6 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC23.89■■□□□ 1.42
SMRP1Q8NCR6 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.41
SMRP1Q8NCR6 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
SMRP1Q8NCR6 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC23.89■■□□□ 1.41
SMRP1Q8NCR6 AICDA-202ENST00000537228 667 ntTSL 5 BASIC23.89■■□□□ 1.41
SMRP1Q8NCR6 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC23.89■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms