Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC15.33■□□□□ 0.05
LINC01561Q8N1V8 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
LINC01561Q8N1V8 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC15.33■□□□□ 0.05
LINC01561Q8N1V8 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
LINC01561Q8N1V8 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.05
LINC01561Q8N1V8 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC01561Q8N1V8 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC01561Q8N1V8 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
LINC01561Q8N1V8 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
LINC01561Q8N1V8 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
LINC01561Q8N1V8 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC01561Q8N1V8 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC01561Q8N1V8 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
LINC01561Q8N1V8 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC01561Q8N1V8 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC01561Q8N1V8 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC01561Q8N1V8 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC01561Q8N1V8 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC01561Q8N1V8 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
LINC01561Q8N1V8 AC009831.1-201ENST00000580420 1582 ntBASIC15.32■□□□□ 0.04
LINC01561Q8N1V8 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC01561Q8N1V8 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC01561Q8N1V8 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC01561Q8N1V8 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC01561Q8N1V8 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC01561Q8N1V8 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC15.32■□□□□ 0.04
LINC01561Q8N1V8 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC01561Q8N1V8 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC01561Q8N1V8 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
LINC01561Q8N1V8 AC133552.2-201ENST00000619106 1032 ntBASIC15.32■□□□□ 0.04
LINC01561Q8N1V8 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC01561Q8N1V8 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
LINC01561Q8N1V8 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC01561Q8N1V8 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LINC01561Q8N1V8 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC01561Q8N1V8 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC15.31■□□□□ 0.04
LINC01561Q8N1V8 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
LINC01561Q8N1V8 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC01561Q8N1V8 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC01561Q8N1V8 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC15.31■□□□□ 0.04
LINC01561Q8N1V8 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC01561Q8N1V8 GPX1-201ENST00000419349 1106 ntBASIC15.31■□□□□ 0.04
LINC01561Q8N1V8 STK32C-205ENST00000456004 607 ntTSL 2 BASIC15.31■□□□□ 0.04
LINC01561Q8N1V8 AC087393.1-201ENST00000582896 145 ntBASIC15.31■□□□□ 0.04
LINC01561Q8N1V8 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC01561Q8N1V8 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC15.31■□□□□ 0.04
LINC01561Q8N1V8 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LINC01561Q8N1V8 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LINC01561Q8N1V8 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC01561Q8N1V8 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC01561Q8N1V8 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC01561Q8N1V8 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC01561Q8N1V8 IDNK-203ENST00000405990 629 ntTSL 2 BASIC15.3■□□□□ 0.04
LINC01561Q8N1V8 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
LINC01561Q8N1V8 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
LINC01561Q8N1V8 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC15.3■□□□□ 0.04
LINC01561Q8N1V8 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LINC01561Q8N1V8 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC01561Q8N1V8 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC01561Q8N1V8 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC01561Q8N1V8 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC01561Q8N1V8 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC01561Q8N1V8 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC01561Q8N1V8 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC01561Q8N1V8 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC01561Q8N1V8 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC01561Q8N1V8 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC01561Q8N1V8 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC01561Q8N1V8 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
LINC01561Q8N1V8 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LINC01561Q8N1V8 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
LINC01561Q8N1V8 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC01561Q8N1V8 RPS2-202ENST00000526522 924 ntTSL 2 BASIC15.29■□□□□ 0.04
LINC01561Q8N1V8 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
LINC01561Q8N1V8 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC15.29■□□□□ 0.04
LINC01561Q8N1V8 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC15.29■□□□□ 0.04
LINC01561Q8N1V8 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC01561Q8N1V8 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
LINC01561Q8N1V8 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC01561Q8N1V8 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
LINC01561Q8N1V8 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
LINC01561Q8N1V8 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
LINC01561Q8N1V8 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
LINC01561Q8N1V8 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LINC01561Q8N1V8 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
LINC01561Q8N1V8 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC01561Q8N1V8 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC01561Q8N1V8 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
LINC01561Q8N1V8 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC15.28■□□□□ 0.04
LINC01561Q8N1V8 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC01561Q8N1V8 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LINC01561Q8N1V8 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LINC01561Q8N1V8 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC01561Q8N1V8 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC01561Q8N1V8 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
LINC01561Q8N1V8 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC01561Q8N1V8 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
LINC01561Q8N1V8 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LINC01561Q8N1V8 AC011551.1-201ENST00000614101 683 ntBASIC15.27■□□□□ 0.04
LINC01561Q8N1V8 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms