Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 ALDH1A3-203ENST00000557963 1670 ntBASIC20.92■□□□□ 0.94
ZNF440Q8IYI8 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
ZNF440Q8IYI8 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ZNF440Q8IYI8 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZNF440Q8IYI8 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZNF440Q8IYI8 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZNF440Q8IYI8 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ZNF440Q8IYI8 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ZNF440Q8IYI8 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.91■□□□□ 0.94
ZNF440Q8IYI8 AL031848.2-201ENST00000607670 837 ntBASIC20.91■□□□□ 0.94
ZNF440Q8IYI8 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
ZNF440Q8IYI8 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZNF440Q8IYI8 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.9■□□□□ 0.94
ZNF440Q8IYI8 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.9■□□□□ 0.94
ZNF440Q8IYI8 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.9■□□□□ 0.94
ZNF440Q8IYI8 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
ZNF440Q8IYI8 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZNF440Q8IYI8 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
ZNF440Q8IYI8 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
ZNF440Q8IYI8 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
ZNF440Q8IYI8 AC004448.1-201ENST00000458332 883 ntBASIC20.9■□□□□ 0.94
ZNF440Q8IYI8 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.9■□□□□ 0.94
ZNF440Q8IYI8 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZNF440Q8IYI8 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ZNF440Q8IYI8 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ZNF440Q8IYI8 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
ZNF440Q8IYI8 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
ZNF440Q8IYI8 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
ZNF440Q8IYI8 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
ZNF440Q8IYI8 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.89■□□□□ 0.93
ZNF440Q8IYI8 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ZNF440Q8IYI8 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ZNF440Q8IYI8 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
ZNF440Q8IYI8 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ZNF440Q8IYI8 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ZNF440Q8IYI8 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ZNF440Q8IYI8 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ZNF440Q8IYI8 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ZNF440Q8IYI8 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ZNF440Q8IYI8 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
ZNF440Q8IYI8 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ZNF440Q8IYI8 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ZNF440Q8IYI8 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ZNF440Q8IYI8 AC137630.3-201ENST00000607245 391 ntBASIC20.88■□□□□ 0.93
ZNF440Q8IYI8 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.88■□□□□ 0.93
ZNF440Q8IYI8 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ZNF440Q8IYI8 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
ZNF440Q8IYI8 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
ZNF440Q8IYI8 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.88■□□□□ 0.93
ZNF440Q8IYI8 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ZNF440Q8IYI8 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.87■□□□□ 0.93
ZNF440Q8IYI8 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ZNF440Q8IYI8 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.87■□□□□ 0.93
ZNF440Q8IYI8 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.87■□□□□ 0.93
ZNF440Q8IYI8 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
ZNF440Q8IYI8 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
ZNF440Q8IYI8 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ZNF440Q8IYI8 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ZNF440Q8IYI8 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.86■□□□□ 0.93
ZNF440Q8IYI8 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF440Q8IYI8 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
ZNF440Q8IYI8 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF440Q8IYI8 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF440Q8IYI8 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF440Q8IYI8 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF440Q8IYI8 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF440Q8IYI8 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.86■□□□□ 0.93
ZNF440Q8IYI8 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.86■□□□□ 0.93
ZNF440Q8IYI8 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF440Q8IYI8 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF440Q8IYI8 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
ZNF440Q8IYI8 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF440Q8IYI8 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF440Q8IYI8 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF440Q8IYI8 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF440Q8IYI8 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF440Q8IYI8 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZNF440Q8IYI8 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.84■□□□□ 0.93
ZNF440Q8IYI8 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZNF440Q8IYI8 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
ZNF440Q8IYI8 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
ZNF440Q8IYI8 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ZNF440Q8IYI8 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ZNF440Q8IYI8 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.93
ZNF440Q8IYI8 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.83■□□□□ 0.93
ZNF440Q8IYI8 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.83■□□□□ 0.93
ZNF440Q8IYI8 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ZNF440Q8IYI8 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ZNF440Q8IYI8 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.83■□□□□ 0.92
ZNF440Q8IYI8 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.82■□□□□ 0.92
ZNF440Q8IYI8 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
ZNF440Q8IYI8 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZNF440Q8IYI8 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.82■□□□□ 0.92
ZNF440Q8IYI8 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
ZNF440Q8IYI8 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ZNF440Q8IYI8 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.82■□□□□ 0.92
ZNF440Q8IYI8 DUSP8P5-201ENST00000422884 1815 ntBASIC20.82■□□□□ 0.92
ZNF440Q8IYI8 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZNF440Q8IYI8 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZNF440Q8IYI8 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms