Protein–RNA interactions for Protein: Q7RTT5

SSX7, Protein SSX7, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX7Q7RTT5 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SSX7Q7RTT5 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC18.16■□□□□ 0.5
SSX7Q7RTT5 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSX7Q7RTT5 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.16■□□□□ 0.5
SSX7Q7RTT5 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC18.16■□□□□ 0.5
SSX7Q7RTT5 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSX7Q7RTT5 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SSX7Q7RTT5 ZNRF2P2-203ENST00000454624 420 ntBASIC18.16■□□□□ 0.5
SSX7Q7RTT5 GUSBP5-202ENST00000510805 1989 ntBASIC18.16■□□□□ 0.5
SSX7Q7RTT5 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSX7Q7RTT5 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SSX7Q7RTT5 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSX7Q7RTT5 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC18.16■□□□□ 0.5
SSX7Q7RTT5 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.16■□□□□ 0.5
SSX7Q7RTT5 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSX7Q7RTT5 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.16■□□□□ 0.5
SSX7Q7RTT5 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
SSX7Q7RTT5 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SSX7Q7RTT5 PKD1P6-201ENST00000343738 4769 ntBASIC18.15■□□□□ 0.5
SSX7Q7RTT5 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSX7Q7RTT5 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SSX7Q7RTT5 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC18.15■□□□□ 0.5
SSX7Q7RTT5 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSX7Q7RTT5 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SSX7Q7RTT5 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.15■□□□□ 0.5
SSX7Q7RTT5 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSX7Q7RTT5 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
SSX7Q7RTT5 AC008813.1-201ENST00000536597 885 ntBASIC18.15■□□□□ 0.5
SSX7Q7RTT5 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
SSX7Q7RTT5 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.15■□□□□ 0.5
SSX7Q7RTT5 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SSX7Q7RTT5 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSX7Q7RTT5 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.15■□□□□ 0.5
SSX7Q7RTT5 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSX7Q7RTT5 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSX7Q7RTT5 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.15■□□□□ 0.5
SSX7Q7RTT5 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSX7Q7RTT5 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC18.14■□□□□ 0.5
SSX7Q7RTT5 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SSX7Q7RTT5 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
SSX7Q7RTT5 ANOS2P-203ENST00000472227 1816 ntBASIC18.14■□□□□ 0.5
SSX7Q7RTT5 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
SSX7Q7RTT5 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SSX7Q7RTT5 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SSX7Q7RTT5 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SSX7Q7RTT5 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
SSX7Q7RTT5 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SSX7Q7RTT5 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SSX7Q7RTT5 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SSX7Q7RTT5 CHST11-203ENST00000547956 936 ntTSL 2 BASIC18.14■□□□□ 0.49
SSX7Q7RTT5 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SSX7Q7RTT5 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
SSX7Q7RTT5 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SSX7Q7RTT5 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
SSX7Q7RTT5 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
SSX7Q7RTT5 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SSX7Q7RTT5 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC18.13■□□□□ 0.49
SSX7Q7RTT5 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.13■□□□□ 0.49
SSX7Q7RTT5 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.13■□□□□ 0.49
SSX7Q7RTT5 CHST11-202ENST00000546689 756 ntTSL 2 BASIC18.13■□□□□ 0.49
SSX7Q7RTT5 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SSX7Q7RTT5 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SSX7Q7RTT5 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SSX7Q7RTT5 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SSX7Q7RTT5 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
SSX7Q7RTT5 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
SSX7Q7RTT5 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SSX7Q7RTT5 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SSX7Q7RTT5 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SSX7Q7RTT5 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.12■□□□□ 0.49
SSX7Q7RTT5 PVT1-219ENST00000523427 938 ntTSL 3 BASIC18.12■□□□□ 0.49
SSX7Q7RTT5 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC18.12■□□□□ 0.49
SSX7Q7RTT5 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SSX7Q7RTT5 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC18.12■□□□□ 0.49
SSX7Q7RTT5 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SSX7Q7RTT5 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.12■□□□□ 0.49
SSX7Q7RTT5 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SSX7Q7RTT5 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SSX7Q7RTT5 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC18.12■□□□□ 0.49
SSX7Q7RTT5 DUSP8P3-201ENST00000399571 1760 ntBASIC18.12■□□□□ 0.49
SSX7Q7RTT5 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC18.12■□□□□ 0.49
SSX7Q7RTT5 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SSX7Q7RTT5 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC18.12■□□□□ 0.49
SSX7Q7RTT5 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SSX7Q7RTT5 AC137767.1-201ENST00000602918 1920 ntBASIC18.11■□□□□ 0.49
SSX7Q7RTT5 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SSX7Q7RTT5 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SSX7Q7RTT5 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC18.11■□□□□ 0.49
SSX7Q7RTT5 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SSX7Q7RTT5 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SSX7Q7RTT5 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SSX7Q7RTT5 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SSX7Q7RTT5 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SSX7Q7RTT5 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
SSX7Q7RTT5 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SSX7Q7RTT5 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
SSX7Q7RTT5 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SSX7Q7RTT5 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
SSX7Q7RTT5 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SSX7Q7RTT5 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms