Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
C11orf88Q6PI97 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
C11orf88Q6PI97 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
C11orf88Q6PI97 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
C11orf88Q6PI97 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
C11orf88Q6PI97 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
C11orf88Q6PI97 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
C11orf88Q6PI97 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
C11orf88Q6PI97 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC19.72■□□□□ 0.75
C11orf88Q6PI97 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
C11orf88Q6PI97 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
C11orf88Q6PI97 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
C11orf88Q6PI97 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.72■□□□□ 0.75
C11orf88Q6PI97 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
C11orf88Q6PI97 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
C11orf88Q6PI97 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
C11orf88Q6PI97 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
C11orf88Q6PI97 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.71■□□□□ 0.75
C11orf88Q6PI97 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
C11orf88Q6PI97 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
C11orf88Q6PI97 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC19.71■□□□□ 0.75
C11orf88Q6PI97 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
C11orf88Q6PI97 U85056.1-201ENST00000616429 682 ntBASIC19.71■□□□□ 0.75
C11orf88Q6PI97 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
C11orf88Q6PI97 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
C11orf88Q6PI97 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
C11orf88Q6PI97 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
C11orf88Q6PI97 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
C11orf88Q6PI97 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
C11orf88Q6PI97 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC19.7■□□□□ 0.74
C11orf88Q6PI97 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
C11orf88Q6PI97 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
C11orf88Q6PI97 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
C11orf88Q6PI97 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC19.7■□□□□ 0.74
C11orf88Q6PI97 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
C11orf88Q6PI97 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.69■□□□□ 0.74
C11orf88Q6PI97 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
C11orf88Q6PI97 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
C11orf88Q6PI97 AC004812.2-201ENST00000611079 2094 ntBASIC19.69■□□□□ 0.74
C11orf88Q6PI97 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
C11orf88Q6PI97 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
C11orf88Q6PI97 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.69■□□□□ 0.74
C11orf88Q6PI97 ABCB10P4-201ENST00000566803 2184 ntBASIC19.69■□□□□ 0.74
C11orf88Q6PI97 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
C11orf88Q6PI97 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.69■□□□□ 0.74
C11orf88Q6PI97 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
C11orf88Q6PI97 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
C11orf88Q6PI97 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC19.69■□□□□ 0.74
C11orf88Q6PI97 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
C11orf88Q6PI97 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.69■□□□□ 0.74
C11orf88Q6PI97 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
C11orf88Q6PI97 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
C11orf88Q6PI97 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
C11orf88Q6PI97 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
C11orf88Q6PI97 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
C11orf88Q6PI97 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
C11orf88Q6PI97 AL157400.5-201ENST00000507624 621 ntBASIC19.68■□□□□ 0.74
C11orf88Q6PI97 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
C11orf88Q6PI97 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.68■□□□□ 0.74
C11orf88Q6PI97 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
C11orf88Q6PI97 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
C11orf88Q6PI97 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
C11orf88Q6PI97 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
C11orf88Q6PI97 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
C11orf88Q6PI97 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.68■□□□□ 0.74
C11orf88Q6PI97 SLC6A10P-202ENST00000431994 2058 ntBASIC19.67■□□□□ 0.74
C11orf88Q6PI97 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
C11orf88Q6PI97 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.67■□□□□ 0.74
C11orf88Q6PI97 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
C11orf88Q6PI97 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
C11orf88Q6PI97 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
C11orf88Q6PI97 TSPY13P-201ENST00000338964 914 ntBASIC19.67■□□□□ 0.74
C11orf88Q6PI97 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
C11orf88Q6PI97 AC007029.1-201ENST00000604183 313 ntBASIC19.67■□□□□ 0.74
C11orf88Q6PI97 MOB2-207ENST00000614710 705 ntTSL 5 BASIC19.67■□□□□ 0.74
C11orf88Q6PI97 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
C11orf88Q6PI97 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
C11orf88Q6PI97 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
C11orf88Q6PI97 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
C11orf88Q6PI97 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
C11orf88Q6PI97 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
C11orf88Q6PI97 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
C11orf88Q6PI97 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
C11orf88Q6PI97 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
C11orf88Q6PI97 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC19.66■□□□□ 0.74
C11orf88Q6PI97 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
C11orf88Q6PI97 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
C11orf88Q6PI97 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
C11orf88Q6PI97 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.66■□□□□ 0.74
C11orf88Q6PI97 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
C11orf88Q6PI97 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
C11orf88Q6PI97 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
C11orf88Q6PI97 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
C11orf88Q6PI97 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
C11orf88Q6PI97 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.65■□□□□ 0.74
C11orf88Q6PI97 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
C11orf88Q6PI97 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.65■□□□□ 0.74
C11orf88Q6PI97 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
C11orf88Q6PI97 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
C11orf88Q6PI97 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms