Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.72■□□□□ 0.91
TMEM53Q6P2H8 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.72■□□□□ 0.91
TMEM53Q6P2H8 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.72■□□□□ 0.91
TMEM53Q6P2H8 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.72■□□□□ 0.91
TMEM53Q6P2H8 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
TMEM53Q6P2H8 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.71■□□□□ 0.91
TMEM53Q6P2H8 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM53Q6P2H8 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM53Q6P2H8 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM53Q6P2H8 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
TMEM53Q6P2H8 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM53Q6P2H8 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.91
TMEM53Q6P2H8 AL033527.3-201ENST00000566366 1196 ntBASIC20.7■□□□□ 0.9
TMEM53Q6P2H8 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TMEM53Q6P2H8 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TMEM53Q6P2H8 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TMEM53Q6P2H8 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
TMEM53Q6P2H8 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TMEM53Q6P2H8 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TMEM53Q6P2H8 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM53Q6P2H8 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM53Q6P2H8 DUSP8P5-201ENST00000422884 1815 ntBASIC20.69■□□□□ 0.9
TMEM53Q6P2H8 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
TMEM53Q6P2H8 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM53Q6P2H8 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM53Q6P2H8 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM53Q6P2H8 AC074183.2-201ENST00000623112 922 ntBASIC20.69■□□□□ 0.9
TMEM53Q6P2H8 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM53Q6P2H8 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM53Q6P2H8 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.69■□□□□ 0.9
TMEM53Q6P2H8 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.69■□□□□ 0.9
TMEM53Q6P2H8 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM53Q6P2H8 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TMEM53Q6P2H8 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TMEM53Q6P2H8 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TMEM53Q6P2H8 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TMEM53Q6P2H8 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TMEM53Q6P2H8 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.68■□□□□ 0.9
TMEM53Q6P2H8 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TMEM53Q6P2H8 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TMEM53Q6P2H8 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.68■□□□□ 0.9
TMEM53Q6P2H8 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.68■□□□□ 0.9
TMEM53Q6P2H8 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TMEM53Q6P2H8 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
TMEM53Q6P2H8 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TMEM53Q6P2H8 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TMEM53Q6P2H8 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.67■□□□□ 0.9
TMEM53Q6P2H8 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.67■□□□□ 0.9
TMEM53Q6P2H8 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.67■□□□□ 0.9
TMEM53Q6P2H8 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.67■□□□□ 0.9
TMEM53Q6P2H8 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.67■□□□□ 0.9
TMEM53Q6P2H8 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TMEM53Q6P2H8 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TMEM53Q6P2H8 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM53Q6P2H8 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM53Q6P2H8 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM53Q6P2H8 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM53Q6P2H8 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
TMEM53Q6P2H8 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM53Q6P2H8 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM53Q6P2H8 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.66■□□□□ 0.9
TMEM53Q6P2H8 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM53Q6P2H8 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
TMEM53Q6P2H8 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
TMEM53Q6P2H8 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TMEM53Q6P2H8 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TMEM53Q6P2H8 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
TMEM53Q6P2H8 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TMEM53Q6P2H8 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
TMEM53Q6P2H8 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.65■□□□□ 0.9
TMEM53Q6P2H8 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TMEM53Q6P2H8 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.65■□□□□ 0.9
TMEM53Q6P2H8 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
TMEM53Q6P2H8 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TMEM53Q6P2H8 AC092667.1-201ENST00000434301 2586 ntBASIC20.65■□□□□ 0.9
TMEM53Q6P2H8 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TMEM53Q6P2H8 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TMEM53Q6P2H8 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.64■□□□□ 0.9
TMEM53Q6P2H8 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
TMEM53Q6P2H8 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TMEM53Q6P2H8 LONRF2P2-201ENST00000439212 571 ntBASIC20.64■□□□□ 0.89
TMEM53Q6P2H8 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.64■□□□□ 0.89
TMEM53Q6P2H8 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.64■□□□□ 0.89
TMEM53Q6P2H8 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.64■□□□□ 0.89
TMEM53Q6P2H8 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.64■□□□□ 0.89
TMEM53Q6P2H8 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
TMEM53Q6P2H8 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TMEM53Q6P2H8 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TMEM53Q6P2H8 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM53Q6P2H8 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.63■□□□□ 0.89
TMEM53Q6P2H8 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.63■□□□□ 0.89
TMEM53Q6P2H8 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM53Q6P2H8 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM53Q6P2H8 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM53Q6P2H8 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM53Q6P2H8 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM53Q6P2H8 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM53Q6P2H8 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM53Q6P2H8 FOXO3B-201ENST00000395675 1928 ntBASIC20.63■□□□□ 0.89
TMEM53Q6P2H8 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms