Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.58■■□□□ 1.04
LPCAT4Q643R3 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
LPCAT4Q643R3 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
LPCAT4Q643R3 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
LPCAT4Q643R3 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
LPCAT4Q643R3 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.58■■□□□ 1.04
LPCAT4Q643R3 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.58■■□□□ 1.04
LPCAT4Q643R3 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.57■■□□□ 1.04
LPCAT4Q643R3 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LPCAT4Q643R3 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LPCAT4Q643R3 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.57■■□□□ 1.04
LPCAT4Q643R3 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LPCAT4Q643R3 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LPCAT4Q643R3 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LPCAT4Q643R3 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LPCAT4Q643R3 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
LPCAT4Q643R3 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.56■■□□□ 1.04
LPCAT4Q643R3 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LPCAT4Q643R3 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LPCAT4Q643R3 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
LPCAT4Q643R3 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC21.56■■□□□ 1.04
LPCAT4Q643R3 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LPCAT4Q643R3 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.56■■□□□ 1.04
LPCAT4Q643R3 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LPCAT4Q643R3 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LPCAT4Q643R3 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.55■■□□□ 1.04
LPCAT4Q643R3 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
LPCAT4Q643R3 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
LPCAT4Q643R3 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC21.55■■□□□ 1.04
LPCAT4Q643R3 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.55■■□□□ 1.04
LPCAT4Q643R3 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.55■■□□□ 1.04
LPCAT4Q643R3 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.55■■□□□ 1.04
LPCAT4Q643R3 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LPCAT4Q643R3 AP006261.1-201ENST00000584783 668 ntBASIC21.54■■□□□ 1.04
LPCAT4Q643R3 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
LPCAT4Q643R3 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.54■■□□□ 1.04
LPCAT4Q643R3 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LPCAT4Q643R3 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LPCAT4Q643R3 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LPCAT4Q643R3 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LPCAT4Q643R3 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
LPCAT4Q643R3 AC148477.6-201ENST00000623746 465 ntBASIC21.53■■□□□ 1.04
LPCAT4Q643R3 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LPCAT4Q643R3 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
LPCAT4Q643R3 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
LPCAT4Q643R3 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LPCAT4Q643R3 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LPCAT4Q643R3 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LPCAT4Q643R3 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.52■■□□□ 1.04
LPCAT4Q643R3 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.52■■□□□ 1.04
LPCAT4Q643R3 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
LPCAT4Q643R3 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LPCAT4Q643R3 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LPCAT4Q643R3 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LPCAT4Q643R3 AC087741.3-201ENST00000624270 1347 ntBASIC21.52■■□□□ 1.03
LPCAT4Q643R3 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
LPCAT4Q643R3 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
LPCAT4Q643R3 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LPCAT4Q643R3 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LPCAT4Q643R3 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.51■■□□□ 1.03
LPCAT4Q643R3 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.51■■□□□ 1.03
LPCAT4Q643R3 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LPCAT4Q643R3 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LPCAT4Q643R3 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.51■■□□□ 1.03
LPCAT4Q643R3 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LPCAT4Q643R3 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LPCAT4Q643R3 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.5■■□□□ 1.03
LPCAT4Q643R3 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LPCAT4Q643R3 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LPCAT4Q643R3 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.5■■□□□ 1.03
LPCAT4Q643R3 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
LPCAT4Q643R3 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LPCAT4Q643R3 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LPCAT4Q643R3 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
LPCAT4Q643R3 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
LPCAT4Q643R3 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LPCAT4Q643R3 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
LPCAT4Q643R3 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
LPCAT4Q643R3 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.48■■□□□ 1.03
LPCAT4Q643R3 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
LPCAT4Q643R3 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
LPCAT4Q643R3 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.48■■□□□ 1.03
LPCAT4Q643R3 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
LPCAT4Q643R3 AC242852.2-201ENST00000615738 1807 ntBASIC21.48■■□□□ 1.03
LPCAT4Q643R3 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
LPCAT4Q643R3 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.48■■□□□ 1.03
LPCAT4Q643R3 AC021231.2-201ENST00000594613 730 ntBASIC21.48■■□□□ 1.03
LPCAT4Q643R3 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LPCAT4Q643R3 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LPCAT4Q643R3 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LPCAT4Q643R3 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LPCAT4Q643R3 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
LPCAT4Q643R3 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LPCAT4Q643R3 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
LPCAT4Q643R3 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.47■■□□□ 1.03
LPCAT4Q643R3 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
LPCAT4Q643R3 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
LPCAT4Q643R3 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
LPCAT4Q643R3 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC21.47■■□□□ 1.03
LPCAT4Q643R3 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms