Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC31.79■■■□□ 2.68
CDCA8Q53HL2 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
CDCA8Q53HL2 AC141586.4-201ENST00000624558 1573 ntBASIC31.78■■■□□ 2.68
CDCA8Q53HL2 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
CDCA8Q53HL2 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
CDCA8Q53HL2 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
CDCA8Q53HL2 AC135731.1-201ENST00000569415 2548 ntBASIC31.78■■■□□ 2.68
CDCA8Q53HL2 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
CDCA8Q53HL2 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
CDCA8Q53HL2 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC31.77■■■□□ 2.68
CDCA8Q53HL2 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC31.77■■■□□ 2.68
CDCA8Q53HL2 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC31.77■■■□□ 2.68
CDCA8Q53HL2 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC31.77■■■□□ 2.68
CDCA8Q53HL2 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC31.77■■■□□ 2.68
CDCA8Q53HL2 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC31.77■■■□□ 2.68
CDCA8Q53HL2 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC31.76■■■□□ 2.68
CDCA8Q53HL2 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
CDCA8Q53HL2 AL512631.2-201ENST00000604634 923 ntBASIC31.76■■■□□ 2.67
CDCA8Q53HL2 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
CDCA8Q53HL2 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC31.76■■■□□ 2.67
CDCA8Q53HL2 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
CDCA8Q53HL2 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC31.75■■■□□ 2.67
CDCA8Q53HL2 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC31.75■■■□□ 2.67
CDCA8Q53HL2 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
CDCA8Q53HL2 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC31.75■■■□□ 2.67
CDCA8Q53HL2 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
CDCA8Q53HL2 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
CDCA8Q53HL2 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC31.75■■■□□ 2.67
CDCA8Q53HL2 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
CDCA8Q53HL2 ALDH1A3-203ENST00000557963 1670 ntBASIC31.75■■■□□ 2.67
CDCA8Q53HL2 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC31.75■■■□□ 2.67
CDCA8Q53HL2 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC31.75■■■□□ 2.67
CDCA8Q53HL2 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
CDCA8Q53HL2 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
CDCA8Q53HL2 QDPR-206ENST00000508623 601 ntTSL 3 BASIC31.74■■■□□ 2.67
CDCA8Q53HL2 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
CDCA8Q53HL2 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC31.74■■■□□ 2.67
CDCA8Q53HL2 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC31.73■■■□□ 2.67
CDCA8Q53HL2 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC31.73■■■□□ 2.67
CDCA8Q53HL2 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
CDCA8Q53HL2 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
CDCA8Q53HL2 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC31.73■■■□□ 2.67
CDCA8Q53HL2 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
CDCA8Q53HL2 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC31.73■■■□□ 2.67
CDCA8Q53HL2 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
CDCA8Q53HL2 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
CDCA8Q53HL2 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC31.73■■■□□ 2.67
CDCA8Q53HL2 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
CDCA8Q53HL2 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
CDCA8Q53HL2 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC31.72■■■□□ 2.67
CDCA8Q53HL2 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
CDCA8Q53HL2 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
CDCA8Q53HL2 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
CDCA8Q53HL2 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
CDCA8Q53HL2 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
CDCA8Q53HL2 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
CDCA8Q53HL2 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC31.72■■■□□ 2.67
CDCA8Q53HL2 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
CDCA8Q53HL2 PEMT-206ENST00000435340 960 ntTSL 5 BASIC31.71■■■□□ 2.67
CDCA8Q53HL2 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
CDCA8Q53HL2 RASSF1-AS1-201ENST00000629828 790 ntBASIC31.71■■■□□ 2.67
CDCA8Q53HL2 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
CDCA8Q53HL2 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
CDCA8Q53HL2 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
CDCA8Q53HL2 LINC00543-201ENST00000567234 1845 ntBASIC31.7■■■□□ 2.66
CDCA8Q53HL2 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC31.69■■■□□ 2.66
CDCA8Q53HL2 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
CDCA8Q53HL2 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
CDCA8Q53HL2 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC31.69■■■□□ 2.66
CDCA8Q53HL2 AL139125.2-201ENST00000623134 1869 ntBASIC31.69■■■□□ 2.66
CDCA8Q53HL2 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC31.68■■■□□ 2.66
CDCA8Q53HL2 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC31.68■■■□□ 2.66
CDCA8Q53HL2 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC31.68■■■□□ 2.66
CDCA8Q53HL2 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
CDCA8Q53HL2 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC31.68■■■□□ 2.66
CDCA8Q53HL2 MIR4466-201ENST00000606121 54 ntBASIC31.68■■■□□ 2.66
CDCA8Q53HL2 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
CDCA8Q53HL2 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
CDCA8Q53HL2 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
CDCA8Q53HL2 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC31.68■■■□□ 2.66
CDCA8Q53HL2 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
CDCA8Q53HL2 EI24-204ENST00000527235 1625 ntTSL 5 BASIC31.67■■■□□ 2.66
CDCA8Q53HL2 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC31.67■■■□□ 2.66
CDCA8Q53HL2 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
CDCA8Q53HL2 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
CDCA8Q53HL2 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC31.67■■■□□ 2.66
CDCA8Q53HL2 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
CDCA8Q53HL2 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC31.67■■■□□ 2.66
CDCA8Q53HL2 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
CDCA8Q53HL2 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
CDCA8Q53HL2 AL136116.3-201ENST00000402907 1138 ntBASIC31.66■■■□□ 2.66
CDCA8Q53HL2 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC31.66■■■□□ 2.66
CDCA8Q53HL2 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
CDCA8Q53HL2 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC31.66■■■□□ 2.66
CDCA8Q53HL2 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
CDCA8Q53HL2 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
CDCA8Q53HL2 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC31.65■■■□□ 2.66
CDCA8Q53HL2 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC31.65■■■□□ 2.66
CDCA8Q53HL2 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
CDCA8Q53HL2 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC31.65■■■□□ 2.66
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms