Protein–RNA interactions for Protein: Q3C1V0

MS4A18, Membrane-spanning 4-domains subfamily A member 18, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A18Q3C1V0 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
MS4A18Q3C1V0 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MS4A18Q3C1V0 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MS4A18Q3C1V0 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
MS4A18Q3C1V0 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
MS4A18Q3C1V0 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
MS4A18Q3C1V0 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MS4A18Q3C1V0 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
MS4A18Q3C1V0 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MS4A18Q3C1V0 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
MS4A18Q3C1V0 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.48■□□□□ 0.87
MS4A18Q3C1V0 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
MS4A18Q3C1V0 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
MS4A18Q3C1V0 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
MS4A18Q3C1V0 AC004448.1-201ENST00000458332 883 ntBASIC20.47■□□□□ 0.87
MS4A18Q3C1V0 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
MS4A18Q3C1V0 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
MS4A18Q3C1V0 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
MS4A18Q3C1V0 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
MS4A18Q3C1V0 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.46■□□□□ 0.87
MS4A18Q3C1V0 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.46■□□□□ 0.87
MS4A18Q3C1V0 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
MS4A18Q3C1V0 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
MS4A18Q3C1V0 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
MS4A18Q3C1V0 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.46■□□□□ 0.87
MS4A18Q3C1V0 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.46■□□□□ 0.87
MS4A18Q3C1V0 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
MS4A18Q3C1V0 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
MS4A18Q3C1V0 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
MS4A18Q3C1V0 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
MS4A18Q3C1V0 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.45■□□□□ 0.86
MS4A18Q3C1V0 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.45■□□□□ 0.86
MS4A18Q3C1V0 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.45■□□□□ 0.86
MS4A18Q3C1V0 ALDH1A3-203ENST00000557963 1670 ntBASIC20.45■□□□□ 0.86
MS4A18Q3C1V0 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
MS4A18Q3C1V0 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
MS4A18Q3C1V0 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
MS4A18Q3C1V0 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MS4A18Q3C1V0 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
MS4A18Q3C1V0 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
MS4A18Q3C1V0 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MS4A18Q3C1V0 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MS4A18Q3C1V0 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
MS4A18Q3C1V0 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MS4A18Q3C1V0 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
MS4A18Q3C1V0 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
MS4A18Q3C1V0 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
MS4A18Q3C1V0 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MS4A18Q3C1V0 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.43■□□□□ 0.86
MS4A18Q3C1V0 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MS4A18Q3C1V0 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.43■□□□□ 0.86
MS4A18Q3C1V0 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
MS4A18Q3C1V0 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.43■□□□□ 0.86
MS4A18Q3C1V0 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
MS4A18Q3C1V0 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
MS4A18Q3C1V0 AC021242.3-201ENST00000607598 1377 ntBASIC20.43■□□□□ 0.86
MS4A18Q3C1V0 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
MS4A18Q3C1V0 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
MS4A18Q3C1V0 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MS4A18Q3C1V0 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MS4A18Q3C1V0 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
MS4A18Q3C1V0 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MS4A18Q3C1V0 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
MS4A18Q3C1V0 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
MS4A18Q3C1V0 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.42■□□□□ 0.86
MS4A18Q3C1V0 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MS4A18Q3C1V0 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
MS4A18Q3C1V0 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
MS4A18Q3C1V0 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.42■□□□□ 0.86
MS4A18Q3C1V0 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
MS4A18Q3C1V0 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MS4A18Q3C1V0 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
MS4A18Q3C1V0 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
MS4A18Q3C1V0 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
MS4A18Q3C1V0 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.41■□□□□ 0.86
MS4A18Q3C1V0 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.41■□□□□ 0.86
MS4A18Q3C1V0 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.41■□□□□ 0.86
MS4A18Q3C1V0 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
MS4A18Q3C1V0 SNX5-217ENST00000606557 1087 ntBASIC20.41■□□□□ 0.86
MS4A18Q3C1V0 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
MS4A18Q3C1V0 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.41■□□□□ 0.86
MS4A18Q3C1V0 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
MS4A18Q3C1V0 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MS4A18Q3C1V0 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.41■□□□□ 0.86
MS4A18Q3C1V0 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.41■□□□□ 0.86
MS4A18Q3C1V0 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
MS4A18Q3C1V0 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MS4A18Q3C1V0 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MS4A18Q3C1V0 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
MS4A18Q3C1V0 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
MS4A18Q3C1V0 BX664725.1-201ENST00000438252 379 ntBASIC20.4■□□□□ 0.86
MS4A18Q3C1V0 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.4■□□□□ 0.86
MS4A18Q3C1V0 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.4■□□□□ 0.86
MS4A18Q3C1V0 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MS4A18Q3C1V0 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
MS4A18Q3C1V0 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
MS4A18Q3C1V0 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.4■□□□□ 0.86
MS4A18Q3C1V0 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
MS4A18Q3C1V0 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
MS4A18Q3C1V0 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms