Protein–RNA interactions for Protein: Q16695

HIST3H3, Histone H3.1t, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H3Q16695 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HIST3H3Q16695 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
HIST3H3Q16695 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
HIST3H3Q16695 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HIST3H3Q16695 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.24■□□□□ 0.83
HIST3H3Q16695 AC021242.3-201ENST00000607598 1377 ntBASIC20.23■□□□□ 0.83
HIST3H3Q16695 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
HIST3H3Q16695 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HIST3H3Q16695 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HIST3H3Q16695 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
HIST3H3Q16695 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.23■□□□□ 0.83
HIST3H3Q16695 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.23■□□□□ 0.83
HIST3H3Q16695 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HIST3H3Q16695 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
HIST3H3Q16695 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
HIST3H3Q16695 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HIST3H3Q16695 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HIST3H3Q16695 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
HIST3H3Q16695 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
HIST3H3Q16695 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HIST3H3Q16695 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
HIST3H3Q16695 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HIST3H3Q16695 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.22■□□□□ 0.83
HIST3H3Q16695 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.22■□□□□ 0.83
HIST3H3Q16695 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.22■□□□□ 0.83
HIST3H3Q16695 SNX5-217ENST00000606557 1087 ntBASIC20.22■□□□□ 0.83
HIST3H3Q16695 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HIST3H3Q16695 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HIST3H3Q16695 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HIST3H3Q16695 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HIST3H3Q16695 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HIST3H3Q16695 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HIST3H3Q16695 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.21■□□□□ 0.83
HIST3H3Q16695 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.21■□□□□ 0.83
HIST3H3Q16695 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HIST3H3Q16695 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HIST3H3Q16695 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
HIST3H3Q16695 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.21■□□□□ 0.83
HIST3H3Q16695 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
HIST3H3Q16695 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HIST3H3Q16695 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.21■□□□□ 0.83
HIST3H3Q16695 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HIST3H3Q16695 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.2■□□□□ 0.82
HIST3H3Q16695 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HIST3H3Q16695 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.2■□□□□ 0.82
HIST3H3Q16695 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
HIST3H3Q16695 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HIST3H3Q16695 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
HIST3H3Q16695 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.2■□□□□ 0.82
HIST3H3Q16695 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.2■□□□□ 0.82
HIST3H3Q16695 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.2■□□□□ 0.82
HIST3H3Q16695 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HIST3H3Q16695 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.2■□□□□ 0.82
HIST3H3Q16695 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
HIST3H3Q16695 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
HIST3H3Q16695 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HIST3H3Q16695 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HIST3H3Q16695 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HIST3H3Q16695 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
HIST3H3Q16695 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
HIST3H3Q16695 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HIST3H3Q16695 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
HIST3H3Q16695 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HIST3H3Q16695 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
HIST3H3Q16695 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HIST3H3Q16695 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HIST3H3Q16695 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
HIST3H3Q16695 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HIST3H3Q16695 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HIST3H3Q16695 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
HIST3H3Q16695 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
HIST3H3Q16695 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HIST3H3Q16695 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HIST3H3Q16695 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HIST3H3Q16695 BX664725.1-201ENST00000438252 379 ntBASIC20.18■□□□□ 0.82
HIST3H3Q16695 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.18■□□□□ 0.82
HIST3H3Q16695 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
HIST3H3Q16695 Z92544.1-202ENST00000571933 1220 ntBASIC20.18■□□□□ 0.82
HIST3H3Q16695 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.18■□□□□ 0.82
HIST3H3Q16695 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HIST3H3Q16695 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.18■□□□□ 0.82
HIST3H3Q16695 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HIST3H3Q16695 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.18■□□□□ 0.82
HIST3H3Q16695 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
HIST3H3Q16695 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.18■□□□□ 0.82
HIST3H3Q16695 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
HIST3H3Q16695 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HIST3H3Q16695 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.17■□□□□ 0.82
HIST3H3Q16695 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HIST3H3Q16695 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
HIST3H3Q16695 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HIST3H3Q16695 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.17■□□□□ 0.82
HIST3H3Q16695 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
HIST3H3Q16695 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HIST3H3Q16695 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
HIST3H3Q16695 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HIST3H3Q16695 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
HIST3H3Q16695 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HIST3H3Q16695 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HIST3H3Q16695 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms