Protein–RNA interactions for Protein: Q06406

LSM6, U6 snRNA-associated Sm-like protein LSm6, yeastyeast

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM6Q06406 YBL113W-AYBL113W-A 483 nt3.46□□□□□ -1.86
LSM6Q06406 YOR396C-AYOR396C-A 483 nt3.46□□□□□ -1.86
LSM6Q06406 YPL283W-BYPL283W-B 483 nt3.46□□□□□ -1.86
LSM6Q06406 YPR204C-AYPR204C-A 483 nt3.46□□□□□ -1.86
LSM6Q06406 YMD8YML038C 1329 nt3.45□□□□□ -1.86
LSM6Q06406 PEP5YMR231W 3090 nt3.45□□□□□ -1.86
LSM6Q06406 RRP9YPR137W 1722 nt3.45□□□□□ -1.86
LSM6Q06406 TFS1YLR178C 660 nt3.45□□□□□ -1.86
LSM6Q06406 YPL077CYPL077C 723 nt3.45□□□□□ -1.86
LSM6Q06406 NHP6AYPR052C 282 nt3.45□□□□□ -1.86
LSM6Q06406 CDC15YAR019C 2925 nt3.45□□□□□ -1.86
LSM6Q06406 PAH1YMR165C 2589 nt3.45□□□□□ -1.86
LSM6Q06406 RRN11YML043C 1524 nt3.44□□□□□ -1.86
LSM6Q06406 MET4YNL103W 2019 nt3.44□□□□□ -1.86
LSM6Q06406 GSM1YJL103C 1857 nt3.44□□□□□ -1.86
LSM6Q06406 YDL144CYDL144C 1071 nt3.44□□□□□ -1.86
LSM6Q06406 CAD1YDR423C 1230 nt3.44□□□□□ -1.86
LSM6Q06406 SUT1YGL162W 900 nt3.44□□□□□ -1.86
LSM6Q06406 YJR012CYJR012C 624 nt3.44□□□□□ -1.86
LSM6Q06406 URA1YKL216W 945 nt3.44□□□□□ -1.86
LSM6Q06406 YMR315WYMR315W 1050 nt3.44□□□□□ -1.86
LSM6Q06406 UPC2YDR213W 2742 nt3.44□□□□□ -1.86
LSM6Q06406 YJR124CYJR124C 1347 nt3.44□□□□□ -1.86
LSM6Q06406 TRS85YDR108W 2097 nt3.43□□□□□ -1.86
LSM6Q06406 FHL1YPR104C 2811 nt3.43□□□□□ -1.86
LSM6Q06406 ELP3YPL086C 1674 nt3.43□□□□□ -1.86
LSM6Q06406 HOF1YMR032W 2010 nt3.43□□□□□ -1.86
LSM6Q06406 MAK32YCR019W 1092 nt3.43□□□□□ -1.86
LSM6Q06406 RPS16BYDL083C 432 nt3.43□□□□□ -1.86
LSM6Q06406 YPR109WYPR109W 885 nt3.43□□□□□ -1.86
LSM6Q06406 CAB3YKL088W 1716 nt3.43□□□□□ -1.86
LSM6Q06406 ATR1YML116W 1629 nt3.43□□□□□ -1.86
LSM6Q06406 MNS1YJR131W 1650 nt3.43□□□□□ -1.86
LSM6Q06406 GMC1YDR506C 1827 nt3.42□□□□□ -1.86
LSM6Q06406 LEU1YGL009C 2340 nt3.42□□□□□ -1.86
LSM6Q06406 YCR097W-AYCR097W-A 267 nt3.42□□□□□ -1.86
LSM6Q06406 YHR193C-AYHR193C-A 375 nt3.42□□□□□ -1.86
LSM6Q06406 PUS5YLR165C 765 nt3.42□□□□□ -1.86
LSM6Q06406 CSR1YLR380W 1227 nt3.42□□□□□ -1.86
LSM6Q06406 PUF3YLL013C 2640 nt3.42□□□□□ -1.86
LSM6Q06406 PMC1YGL006W 3522 nt3.42□□□□□ -1.86
LSM6Q06406 RAD1YPL022W 3303 nt3.42□□□□□ -1.86
LSM6Q06406 HIR2YOR038C 2628 nt3.41□□□□□ -1.86
LSM6Q06406 PDR5YOR153W 4536 nt3.41□□□□□ -1.86
LSM6Q06406 RAD28YDR030C 1521 nt3.41□□□□□ -1.86
LSM6Q06406 RRB1YMR131C 1536 nt3.41□□□□□ -1.86
LSM6Q06406 TGL4YKR089C 2733 nt3.41□□□□□ -1.86
LSM6Q06406 NAT2YGR147C 867 nt3.41□□□□□ -1.86
LSM6Q06406 BIO2YGR286C 1128 nt3.41□□□□□ -1.86
LSM6Q06406 COS9YKL219W 1224 nt3.41□□□□□ -1.86
LSM6Q06406 SEC13YLR208W 894 nt3.41□□□□□ -1.86
LSM6Q06406 YNL097W-AYNL097W-A 156 nt3.41□□□□□ -1.86
LSM6Q06406 AVT1YJR001W 1809 nt3.41□□□□□ -1.86
LSM6Q06406 WTM1YOR230W 1314 nt3.41□□□□□ -1.86
LSM6Q06406 ICE2YIL090W 1476 nt3.41□□□□□ -1.86
LSM6Q06406 IZH3YLR023C 1632 nt3.41□□□□□ -1.86
LSM6Q06406 SAP155YFR040W 3009 nt3.4□□□□□ -1.86
LSM6Q06406 AKL1YBR059C 3327 nt3.4□□□□□ -1.86
LSM6Q06406 RPL12AYEL054C 498 nt3.4□□□□□ -1.87
LSM6Q06406 YML119WYML119W 1074 nt3.4□□□□□ -1.87
LSM6Q06406 YOL097W-AYOL097W-A 186 nt3.4□□□□□ -1.87
LSM6Q06406 ALG2YGL065C 1512 nt3.39□□□□□ -1.87
LSM6Q06406 CYM1YDR430C 2970 nt3.39□□□□□ -1.87
LSM6Q06406 VPS72YDR485C 2388 nt3.39□□□□□ -1.87
LSM6Q06406 SUP35YDR172W 2058 nt3.39□□□□□ -1.87
LSM6Q06406 SCM3YDL139C 672 nt3.39□□□□□ -1.87
LSM6Q06406 HST4YDR191W 1113 nt3.39□□□□□ -1.87
LSM6Q06406 SEH1YGL100W 1050 nt3.39□□□□□ -1.87
LSM6Q06406 AIM20YIL158W 615 nt3.39□□□□□ -1.87
LSM6Q06406 YML131WYML131W 1098 nt3.39□□□□□ -1.87
LSM6Q06406 CUZ1YNL155W 825 nt3.39□□□□□ -1.87
LSM6Q06406 TRM10YOL093W 882 nt3.39□□□□□ -1.87
LSM6Q06406 UGA2YBR006W 1494 nt3.39□□□□□ -1.87
LSM6Q06406 MMT2YPL224C 1455 nt3.39□□□□□ -1.87
LSM6Q06406 NHX1YDR456W 1902 nt3.38□□□□□ -1.87
LSM6Q06406 LAS21YJL062W 2493 nt3.38□□□□□ -1.87
LSM6Q06406 NUG1YER006W 1563 nt3.38□□□□□ -1.87
LSM6Q06406 HOYDL227C 1761 nt3.38□□□□□ -1.87
LSM6Q06406 GCR2YNL199C 1605 nt3.38□□□□□ -1.87
LSM6Q06406 VID28YIL017C 2766 nt3.38□□□□□ -1.87
LSM6Q06406 TFG1YGR186W 2208 nt3.38□□□□□ -1.87
LSM6Q06406 DFM1YDR411C 1026 nt3.38□□□□□ -1.87
LSM6Q06406 FAA4YMR246W 2085 nt3.38□□□□□ -1.87
LSM6Q06406 GPI18YBR004C 1302 nt3.38□□□□□ -1.87
LSM6Q06406 snR7-SsnR7-S 179 nt3.37□□□□□ -1.87
LSM6Q06406 AIR2YDL175C 1035 nt3.37□□□□□ -1.87
LSM6Q06406 YJL068CYJL068C 900 nt3.37□□□□□ -1.87
LSM6Q06406 YMR135W-AYMR135W-A 534 nt3.37□□□□□ -1.87
LSM6Q06406 OPY2YPR075C 1083 nt3.37□□□□□ -1.87
LSM6Q06406 YCL022CYCL022C 516 nt3.37□□□□□ -1.87
LSM6Q06406 MPP10YJR002W 1782 nt3.37□□□□□ -1.87
LSM6Q06406 RCK2YLR248W 1833 nt3.37□□□□□ -1.87
LSM6Q06406 PER1YCR044C 1074 nt3.36□□□□□ -1.87
LSM6Q06406 CBF1YJR060W 1056 nt3.36□□□□□ -1.87
LSM6Q06406 PEX30YLR324W 1572 nt3.36□□□□□ -1.87
LSM6Q06406 SLD2YKL108W 1362 nt3.36□□□□□ -1.87
LSM6Q06406 VHS3YOR054C 2025 nt3.36□□□□□ -1.87
LSM6Q06406 VPS73YGL104C 1461 nt3.35□□□□□ -1.87
LSM6Q06406 YTA12YMR089C 2478 nt3.35□□□□□ -1.87
LSM6Q06406 YCR023CYCR023C 1836 nt3.35□□□□□ -1.87
Retrieved 100 of 7,029 protein–RNA pairs in 16.1 ms