Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.7■□□□□ 0.9
RPS4XP62701 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPS4XP62701 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPS4XP62701 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPS4XP62701 GUSBP5-201ENST00000418136 578 ntBASIC20.7■□□□□ 0.9
RPS4XP62701 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.7■□□□□ 0.9
RPS4XP62701 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPS4XP62701 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.7■□□□□ 0.9
RPS4XP62701 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.7■□□□□ 0.9
RPS4XP62701 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RPS4XP62701 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RPS4XP62701 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RPS4XP62701 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RPS4XP62701 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPS4XP62701 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPS4XP62701 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPS4XP62701 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.69■□□□□ 0.9
RPS4XP62701 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
RPS4XP62701 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.69■□□□□ 0.9
RPS4XP62701 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
RPS4XP62701 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RPS4XP62701 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RPS4XP62701 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPS4XP62701 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.69■□□□□ 0.9
RPS4XP62701 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPS4XP62701 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPS4XP62701 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.68■□□□□ 0.9
RPS4XP62701 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPS4XP62701 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
RPS4XP62701 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.68■□□□□ 0.9
RPS4XP62701 AC131212.1-201ENST00000613771 668 ntBASIC20.68■□□□□ 0.9
RPS4XP62701 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RPS4XP62701 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPS4XP62701 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
RPS4XP62701 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPS4XP62701 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPS4XP62701 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
RPS4XP62701 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.67■□□□□ 0.9
RPS4XP62701 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
RPS4XP62701 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.67■□□□□ 0.9
RPS4XP62701 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.67■□□□□ 0.9
RPS4XP62701 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.67■□□□□ 0.9
RPS4XP62701 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPS4XP62701 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPS4XP62701 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.67■□□□□ 0.9
RPS4XP62701 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPS4XP62701 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.67■□□□□ 0.9
RPS4XP62701 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
RPS4XP62701 AL022069.1-201ENST00000568025 1636 ntBASIC20.67■□□□□ 0.9
RPS4XP62701 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPS4XP62701 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.67■□□□□ 0.9
RPS4XP62701 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPS4XP62701 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.66■□□□□ 0.9
RPS4XP62701 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
RPS4XP62701 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
RPS4XP62701 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
RPS4XP62701 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RPS4XP62701 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.66■□□□□ 0.9
RPS4XP62701 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.65■□□□□ 0.9
RPS4XP62701 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RPS4XP62701 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.65■□□□□ 0.9
RPS4XP62701 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPS4XP62701 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.65■□□□□ 0.9
RPS4XP62701 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
RPS4XP62701 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.64■□□□□ 0.9
RPS4XP62701 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RPS4XP62701 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.64■□□□□ 0.9
RPS4XP62701 AC131274.2-201ENST00000580697 1507 ntBASIC20.64■□□□□ 0.9
RPS4XP62701 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.64■□□□□ 0.89
RPS4XP62701 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.64■□□□□ 0.89
RPS4XP62701 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.64■□□□□ 0.89
RPS4XP62701 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.64■□□□□ 0.89
RPS4XP62701 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
RPS4XP62701 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RPS4XP62701 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.64■□□□□ 0.89
RPS4XP62701 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RPS4XP62701 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RPS4XP62701 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RPS4XP62701 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.64■□□□□ 0.89
RPS4XP62701 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
RPS4XP62701 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPS4XP62701 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
RPS4XP62701 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.63■□□□□ 0.89
RPS4XP62701 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.63■□□□□ 0.89
RPS4XP62701 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.63■□□□□ 0.89
RPS4XP62701 THA1P-201ENST00000590384 1145 ntBASIC20.63■□□□□ 0.89
RPS4XP62701 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.63■□□□□ 0.89
RPS4XP62701 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.63■□□□□ 0.89
RPS4XP62701 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPS4XP62701 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPS4XP62701 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
RPS4XP62701 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPS4XP62701 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPS4XP62701 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
RPS4XP62701 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPS4XP62701 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.63■□□□□ 0.89
RPS4XP62701 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RPS4XP62701 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.62■□□□□ 0.89
RPS4XP62701 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RPS4XP62701 AC068473.5-201ENST00000616428 2072 ntBASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms