Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CKS1BP61024 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CKS1BP61024 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CKS1BP61024 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CKS1BP61024 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CKS1BP61024 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CKS1BP61024 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CKS1BP61024 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CKS1BP61024 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CKS1BP61024 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CKS1BP61024 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
CKS1BP61024 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CKS1BP61024 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CKS1BP61024 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CKS1BP61024 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
CKS1BP61024 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CKS1BP61024 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CKS1BP61024 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CKS1BP61024 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CKS1BP61024 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CKS1BP61024 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
CKS1BP61024 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CKS1BP61024 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CKS1BP61024 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CKS1BP61024 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CKS1BP61024 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CKS1BP61024 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CKS1BP61024 MLEC-202ENST00000412616 841 ntTSL 3 BASIC15.81■□□□□ 0.12
CKS1BP61024 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CKS1BP61024 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CKS1BP61024 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
CKS1BP61024 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CKS1BP61024 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CKS1BP61024 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC15.81■□□□□ 0.12
CKS1BP61024 LINC00565-201ENST00000562710 2331 ntBASIC15.8■□□□□ 0.12
CKS1BP61024 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
CKS1BP61024 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CKS1BP61024 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CKS1BP61024 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC15.8■□□□□ 0.12
CKS1BP61024 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CKS1BP61024 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CKS1BP61024 RPS2P35-201ENST00000443417 897 ntBASIC15.8■□□□□ 0.12
CKS1BP61024 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CKS1BP61024 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CKS1BP61024 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
CKS1BP61024 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CKS1BP61024 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CKS1BP61024 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CKS1BP61024 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CKS1BP61024 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CKS1BP61024 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC15.79■□□□□ 0.12
CKS1BP61024 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CKS1BP61024 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CKS1BP61024 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CKS1BP61024 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CKS1BP61024 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CKS1BP61024 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC15.79■□□□□ 0.12
CKS1BP61024 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC15.79■□□□□ 0.12
CKS1BP61024 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC15.79■□□□□ 0.12
CKS1BP61024 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC15.79■□□□□ 0.12
CKS1BP61024 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC15.79■□□□□ 0.12
CKS1BP61024 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CKS1BP61024 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CKS1BP61024 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
CKS1BP61024 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CKS1BP61024 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CKS1BP61024 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CKS1BP61024 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CKS1BP61024 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC15.79■□□□□ 0.12
CKS1BP61024 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CKS1BP61024 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CKS1BP61024 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CKS1BP61024 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC15.78■□□□□ 0.12
CKS1BP61024 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CKS1BP61024 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CKS1BP61024 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
CKS1BP61024 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CKS1BP61024 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC15.78■□□□□ 0.12
CKS1BP61024 RNF166-209ENST00000567844 633 ntTSL 5 BASIC15.78■□□□□ 0.12
CKS1BP61024 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CKS1BP61024 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CKS1BP61024 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CKS1BP61024 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CKS1BP61024 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CKS1BP61024 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CKS1BP61024 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CKS1BP61024 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CKS1BP61024 SLC6A10P-202ENST00000431994 2058 ntBASIC15.77■□□□□ 0.12
CKS1BP61024 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
CKS1BP61024 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
CKS1BP61024 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CKS1BP61024 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CKS1BP61024 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC15.77■□□□□ 0.12
CKS1BP61024 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CKS1BP61024 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC15.77■□□□□ 0.12
CKS1BP61024 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC15.77■□□□□ 0.11
CKS1BP61024 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
CKS1BP61024 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CKS1BP61024 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
CKS1BP61024 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms