Protein–RNA interactions for Protein: P59666

DEFA3, Neutrophil defensin 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA3P59666 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
DEFA3P59666 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
DEFA3P59666 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
DEFA3P59666 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
DEFA3P59666 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.1■□□□□ 0.81
DEFA3P59666 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.1■□□□□ 0.81
DEFA3P59666 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
DEFA3P59666 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
DEFA3P59666 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.1■□□□□ 0.81
DEFA3P59666 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
DEFA3P59666 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
DEFA3P59666 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
DEFA3P59666 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
DEFA3P59666 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
DEFA3P59666 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
DEFA3P59666 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
DEFA3P59666 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
DEFA3P59666 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.09■□□□□ 0.81
DEFA3P59666 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.09■□□□□ 0.81
DEFA3P59666 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
DEFA3P59666 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
DEFA3P59666 AC110285.7-201ENST00000624417 1536 ntBASIC20.08■□□□□ 0.81
DEFA3P59666 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
DEFA3P59666 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
DEFA3P59666 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
DEFA3P59666 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
DEFA3P59666 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
DEFA3P59666 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
DEFA3P59666 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
DEFA3P59666 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.08■□□□□ 0.8
DEFA3P59666 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
DEFA3P59666 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
DEFA3P59666 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
DEFA3P59666 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
DEFA3P59666 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
DEFA3P59666 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.07■□□□□ 0.8
DEFA3P59666 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.07■□□□□ 0.8
DEFA3P59666 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
DEFA3P59666 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.06■□□□□ 0.8
DEFA3P59666 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
DEFA3P59666 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
DEFA3P59666 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
DEFA3P59666 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
DEFA3P59666 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
DEFA3P59666 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
DEFA3P59666 MIR6089-201ENST00000616698 64 ntBASIC20.06■□□□□ 0.8
DEFA3P59666 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
DEFA3P59666 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.06■□□□□ 0.8
DEFA3P59666 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
DEFA3P59666 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
DEFA3P59666 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.06■□□□□ 0.8
DEFA3P59666 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
DEFA3P59666 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
DEFA3P59666 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.05■□□□□ 0.8
DEFA3P59666 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DEFA3P59666 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DEFA3P59666 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
DEFA3P59666 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
DEFA3P59666 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
DEFA3P59666 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.05■□□□□ 0.8
DEFA3P59666 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
DEFA3P59666 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
DEFA3P59666 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
DEFA3P59666 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DEFA3P59666 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DEFA3P59666 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DEFA3P59666 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DEFA3P59666 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
DEFA3P59666 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DEFA3P59666 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.04■□□□□ 0.8
DEFA3P59666 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC20.04■□□□□ 0.8
DEFA3P59666 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DEFA3P59666 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
DEFA3P59666 ANOS2P-203ENST00000472227 1816 ntBASIC20.04■□□□□ 0.8
DEFA3P59666 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
DEFA3P59666 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DEFA3P59666 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
DEFA3P59666 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DEFA3P59666 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
DEFA3P59666 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.03■□□□□ 0.8
DEFA3P59666 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
DEFA3P59666 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC20.03■□□□□ 0.8
DEFA3P59666 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC20.03■□□□□ 0.8
DEFA3P59666 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
DEFA3P59666 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DEFA3P59666 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.03■□□□□ 0.8
DEFA3P59666 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
DEFA3P59666 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
DEFA3P59666 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
DEFA3P59666 AC242852.2-201ENST00000615738 1807 ntBASIC20.02■□□□□ 0.8
DEFA3P59666 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
DEFA3P59666 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
DEFA3P59666 EBPL-202ENST00000378268 680 ntTSL 3 BASIC20.02■□□□□ 0.8
DEFA3P59666 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.8
DEFA3P59666 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
DEFA3P59666 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.02■□□□□ 0.8
DEFA3P59666 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.02■□□□□ 0.8
DEFA3P59666 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
DEFA3P59666 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
DEFA3P59666 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms