Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
WNT3AP56704 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC23.15■■□□□ 1.3
WNT3AP56704 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.15■■□□□ 1.3
WNT3AP56704 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.15■■□□□ 1.3
WNT3AP56704 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
WNT3AP56704 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC23.14■■□□□ 1.3
WNT3AP56704 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
WNT3AP56704 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
WNT3AP56704 BX664725.1-201ENST00000438252 379 ntBASIC23.14■■□□□ 1.29
WNT3AP56704 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC23.14■■□□□ 1.29
WNT3AP56704 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC23.14■■□□□ 1.29
WNT3AP56704 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC23.14■■□□□ 1.29
WNT3AP56704 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC23.14■■□□□ 1.29
WNT3AP56704 AL451085.2-201ENST00000605085 799 ntBASIC23.14■■□□□ 1.29
WNT3AP56704 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
WNT3AP56704 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
WNT3AP56704 AC021242.3-201ENST00000607598 1377 ntBASIC23.14■■□□□ 1.29
WNT3AP56704 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
WNT3AP56704 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
WNT3AP56704 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
WNT3AP56704 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
WNT3AP56704 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
WNT3AP56704 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
WNT3AP56704 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
WNT3AP56704 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
WNT3AP56704 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC23.13■■□□□ 1.29
WNT3AP56704 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC23.13■■□□□ 1.29
WNT3AP56704 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
WNT3AP56704 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
WNT3AP56704 ALDH1A3-203ENST00000557963 1670 ntBASIC23.13■■□□□ 1.29
WNT3AP56704 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC23.12■■□□□ 1.29
WNT3AP56704 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC23.12■■□□□ 1.29
WNT3AP56704 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
WNT3AP56704 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
WNT3AP56704 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
WNT3AP56704 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
WNT3AP56704 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC23.12■■□□□ 1.29
WNT3AP56704 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
WNT3AP56704 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
WNT3AP56704 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
WNT3AP56704 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC23.12■■□□□ 1.29
WNT3AP56704 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
WNT3AP56704 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
WNT3AP56704 EI24-204ENST00000527235 1625 ntTSL 5 BASIC23.11■■□□□ 1.29
WNT3AP56704 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC23.11■■□□□ 1.29
WNT3AP56704 AC009299.2-201ENST00000482477 511 ntBASIC23.11■■□□□ 1.29
WNT3AP56704 LSM7-203ENST00000585409 512 ntTSL 2 BASIC23.11■■□□□ 1.29
WNT3AP56704 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC23.11■■□□□ 1.29
WNT3AP56704 SNX5-217ENST00000606557 1087 ntBASIC23.11■■□□□ 1.29
WNT3AP56704 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC23.11■■□□□ 1.29
WNT3AP56704 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
WNT3AP56704 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
WNT3AP56704 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC23.11■■□□□ 1.29
WNT3AP56704 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
WNT3AP56704 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC23.1■■□□□ 1.29
WNT3AP56704 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
WNT3AP56704 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC23.09■■□□□ 1.29
WNT3AP56704 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
WNT3AP56704 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC23.09■■□□□ 1.29
WNT3AP56704 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC23.09■■□□□ 1.29
WNT3AP56704 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC23.09■■□□□ 1.29
WNT3AP56704 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC23.09■■□□□ 1.29
WNT3AP56704 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
WNT3AP56704 Z92544.1-202ENST00000571933 1220 ntBASIC23.09■■□□□ 1.29
WNT3AP56704 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC23.09■■□□□ 1.29
WNT3AP56704 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
WNT3AP56704 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
WNT3AP56704 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
WNT3AP56704 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
WNT3AP56704 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
WNT3AP56704 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC23.08■■□□□ 1.29
WNT3AP56704 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.29
WNT3AP56704 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
WNT3AP56704 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC23.08■■□□□ 1.29
WNT3AP56704 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC23.08■■□□□ 1.29
WNT3AP56704 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
WNT3AP56704 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
WNT3AP56704 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
WNT3AP56704 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC23.08■■□□□ 1.29
WNT3AP56704 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
WNT3AP56704 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.28
WNT3AP56704 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
WNT3AP56704 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
WNT3AP56704 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
WNT3AP56704 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
WNT3AP56704 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC23.07■■□□□ 1.28
WNT3AP56704 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
WNT3AP56704 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC23.07■■□□□ 1.28
WNT3AP56704 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
WNT3AP56704 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
WNT3AP56704 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
WNT3AP56704 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
WNT3AP56704 KRT125P-201ENST00000546827 989 ntBASIC23.06■■□□□ 1.28
WNT3AP56704 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
WNT3AP56704 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
WNT3AP56704 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
WNT3AP56704 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
WNT3AP56704 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
WNT3AP56704 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
WNT3AP56704 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms