Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 MIR6724-4-201ENST00000617390 92 ntBASIC20.17■□□□□ 0.82
FOXG1P55316 MIR6724-3-201ENST00000622482 92 ntBASIC20.17■□□□□ 0.82
FOXG1P55316 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
FOXG1P55316 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXG1P55316 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXG1P55316 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
FOXG1P55316 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
FOXG1P55316 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
FOXG1P55316 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
FOXG1P55316 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.15■□□□□ 0.82
FOXG1P55316 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
FOXG1P55316 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.15■□□□□ 0.82
FOXG1P55316 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.15■□□□□ 0.82
FOXG1P55316 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
FOXG1P55316 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
FOXG1P55316 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
FOXG1P55316 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
FOXG1P55316 LINC00543-201ENST00000567234 1845 ntBASIC20.14■□□□□ 0.81
FOXG1P55316 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
FOXG1P55316 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
FOXG1P55316 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
FOXG1P55316 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
FOXG1P55316 AC004812.2-201ENST00000611079 2094 ntBASIC20.14■□□□□ 0.81
FOXG1P55316 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
FOXG1P55316 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
FOXG1P55316 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
FOXG1P55316 AL117332.1-201ENST00000622628 974 ntBASIC20.13■□□□□ 0.81
FOXG1P55316 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
FOXG1P55316 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
FOXG1P55316 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
FOXG1P55316 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
FOXG1P55316 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.12■□□□□ 0.81
FOXG1P55316 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
FOXG1P55316 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.12■□□□□ 0.81
FOXG1P55316 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.12■□□□□ 0.81
FOXG1P55316 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.12■□□□□ 0.81
FOXG1P55316 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.12■□□□□ 0.81
FOXG1P55316 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.12■□□□□ 0.81
FOXG1P55316 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.12■□□□□ 0.81
FOXG1P55316 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
FOXG1P55316 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
FOXG1P55316 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
FOXG1P55316 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
FOXG1P55316 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.11■□□□□ 0.81
FOXG1P55316 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.11■□□□□ 0.81
FOXG1P55316 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
FOXG1P55316 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.11■□□□□ 0.81
FOXG1P55316 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.11■□□□□ 0.81
FOXG1P55316 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
FOXG1P55316 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.11■□□□□ 0.81
FOXG1P55316 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.11■□□□□ 0.81
FOXG1P55316 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
FOXG1P55316 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.11■□□□□ 0.81
FOXG1P55316 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
FOXG1P55316 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
FOXG1P55316 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
FOXG1P55316 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.1■□□□□ 0.81
FOXG1P55316 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
FOXG1P55316 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.1■□□□□ 0.81
FOXG1P55316 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.1■□□□□ 0.81
FOXG1P55316 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.1■□□□□ 0.81
FOXG1P55316 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
FOXG1P55316 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
FOXG1P55316 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.1■□□□□ 0.81
FOXG1P55316 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
FOXG1P55316 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
FOXG1P55316 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
FOXG1P55316 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
FOXG1P55316 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.09■□□□□ 0.81
FOXG1P55316 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.09■□□□□ 0.81
FOXG1P55316 MIR3621-201ENST00000580529 85 ntBASIC20.09■□□□□ 0.81
FOXG1P55316 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.09■□□□□ 0.81
FOXG1P55316 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.09■□□□□ 0.81
FOXG1P55316 AL161729.1-201ENST00000604104 1402 ntBASIC20.09■□□□□ 0.81
FOXG1P55316 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
FOXG1P55316 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
FOXG1P55316 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.08■□□□□ 0.81
FOXG1P55316 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
FOXG1P55316 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.08■□□□□ 0.81
FOXG1P55316 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
FOXG1P55316 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
FOXG1P55316 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
FOXG1P55316 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.08■□□□□ 0.81
FOXG1P55316 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
FOXG1P55316 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.08■□□□□ 0.81
FOXG1P55316 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
FOXG1P55316 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
FOXG1P55316 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.08■□□□□ 0.8
FOXG1P55316 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
FOXG1P55316 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
FOXG1P55316 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FOXG1P55316 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FOXG1P55316 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
FOXG1P55316 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.07■□□□□ 0.8
FOXG1P55316 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.07■□□□□ 0.8
FOXG1P55316 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.07■□□□□ 0.8
FOXG1P55316 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
FOXG1P55316 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
FOXG1P55316 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.07■□□□□ 0.8
FOXG1P55316 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms