Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.21■□□□□ 0.99
PSMD4P55036 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PSMD4P55036 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PSMD4P55036 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
PSMD4P55036 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.21■□□□□ 0.99
PSMD4P55036 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.21■□□□□ 0.99
PSMD4P55036 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
PSMD4P55036 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
PSMD4P55036 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PSMD4P55036 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.2■□□□□ 0.98
PSMD4P55036 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.2■□□□□ 0.98
PSMD4P55036 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.2■□□□□ 0.98
PSMD4P55036 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PSMD4P55036 AC131274.2-201ENST00000580697 1507 ntBASIC21.2■□□□□ 0.98
PSMD4P55036 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PSMD4P55036 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.2■□□□□ 0.98
PSMD4P55036 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PSMD4P55036 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PSMD4P55036 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.2■□□□□ 0.98
PSMD4P55036 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PSMD4P55036 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.2■□□□□ 0.98
PSMD4P55036 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PSMD4P55036 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PSMD4P55036 AC021242.3-201ENST00000607598 1377 ntBASIC21.2■□□□□ 0.98
PSMD4P55036 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.2■□□□□ 0.98
PSMD4P55036 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PSMD4P55036 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.19■□□□□ 0.98
PSMD4P55036 AL451085.2-201ENST00000605085 799 ntBASIC21.19■□□□□ 0.98
PSMD4P55036 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.19■□□□□ 0.98
PSMD4P55036 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.19■□□□□ 0.98
PSMD4P55036 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.19■□□□□ 0.98
PSMD4P55036 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
PSMD4P55036 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PSMD4P55036 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
PSMD4P55036 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
PSMD4P55036 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
PSMD4P55036 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PSMD4P55036 AC009299.2-201ENST00000482477 511 ntBASIC21.18■□□□□ 0.98
PSMD4P55036 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PSMD4P55036 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
PSMD4P55036 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
PSMD4P55036 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PSMD4P55036 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PSMD4P55036 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PSMD4P55036 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
PSMD4P55036 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.17■□□□□ 0.98
PSMD4P55036 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.17■□□□□ 0.98
PSMD4P55036 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PSMD4P55036 AC004448.1-201ENST00000458332 883 ntBASIC21.17■□□□□ 0.98
PSMD4P55036 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PSMD4P55036 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PSMD4P55036 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.17■□□□□ 0.98
PSMD4P55036 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.17■□□□□ 0.98
PSMD4P55036 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PSMD4P55036 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PSMD4P55036 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PSMD4P55036 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PSMD4P55036 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
PSMD4P55036 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
PSMD4P55036 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.16■□□□□ 0.98
PSMD4P55036 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PSMD4P55036 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.16■□□□□ 0.98
PSMD4P55036 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.16■□□□□ 0.98
PSMD4P55036 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.16■□□□□ 0.98
PSMD4P55036 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PSMD4P55036 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PSMD4P55036 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
PSMD4P55036 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
PSMD4P55036 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.15■□□□□ 0.98
PSMD4P55036 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.15■□□□□ 0.98
PSMD4P55036 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PSMD4P55036 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
PSMD4P55036 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PSMD4P55036 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PSMD4P55036 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PSMD4P55036 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
PSMD4P55036 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
PSMD4P55036 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
PSMD4P55036 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PSMD4P55036 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
PSMD4P55036 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
PSMD4P55036 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.14■□□□□ 0.97
PSMD4P55036 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.14■□□□□ 0.97
PSMD4P55036 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
PSMD4P55036 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PSMD4P55036 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PSMD4P55036 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PSMD4P55036 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.14■□□□□ 0.97
PSMD4P55036 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PSMD4P55036 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PSMD4P55036 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
PSMD4P55036 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
PSMD4P55036 AC239859.2-201ENST00000444165 318 ntBASIC21.13■□□□□ 0.97
PSMD4P55036 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.13■□□□□ 0.97
PSMD4P55036 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.13■□□□□ 0.97
PSMD4P55036 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PSMD4P55036 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PSMD4P55036 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PSMD4P55036 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
PSMD4P55036 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms