Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
LBX1P52954 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC26.58■■□□□ 1.85
LBX1P52954 AC009102.2-201ENST00000606772 1639 ntBASIC26.58■■□□□ 1.85
LBX1P52954 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
LBX1P52954 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
LBX1P52954 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
LBX1P52954 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC26.58■■□□□ 1.85
LBX1P52954 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
LBX1P52954 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC26.58■■□□□ 1.85
LBX1P52954 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC26.58■■□□□ 1.85
LBX1P52954 REST-206ENST00000612429 1376 ntTSL 5 BASIC26.58■■□□□ 1.84
LBX1P52954 REST-207ENST00000616975 1370 ntTSL 5 BASIC26.58■■□□□ 1.84
LBX1P52954 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
LBX1P52954 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
LBX1P52954 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
LBX1P52954 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC26.57■■□□□ 1.84
LBX1P52954 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC26.57■■□□□ 1.84
LBX1P52954 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC26.57■■□□□ 1.84
LBX1P52954 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
LBX1P52954 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC26.56■■□□□ 1.84
LBX1P52954 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC26.56■■□□□ 1.84
LBX1P52954 WT1-AS_3.1-201ENST00000613262 234 ntBASIC26.56■■□□□ 1.84
LBX1P52954 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC26.55■■□□□ 1.84
LBX1P52954 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
LBX1P52954 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
LBX1P52954 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC26.55■■□□□ 1.84
LBX1P52954 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
LBX1P52954 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC26.55■■□□□ 1.84
LBX1P52954 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC26.55■■□□□ 1.84
LBX1P52954 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
LBX1P52954 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
LBX1P52954 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
LBX1P52954 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
LBX1P52954 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
LBX1P52954 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC26.54■■□□□ 1.84
LBX1P52954 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
LBX1P52954 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
LBX1P52954 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
LBX1P52954 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
LBX1P52954 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC26.53■■□□□ 1.84
LBX1P52954 KRT18P6-201ENST00000555540 1265 ntBASIC26.53■■□□□ 1.84
LBX1P52954 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC26.53■■□□□ 1.84
LBX1P52954 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
LBX1P52954 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
LBX1P52954 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
LBX1P52954 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
LBX1P52954 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
LBX1P52954 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC26.52■■□□□ 1.84
LBX1P52954 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC26.52■■□□□ 1.84
LBX1P52954 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
LBX1P52954 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC26.52■■□□□ 1.84
LBX1P52954 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC26.52■■□□□ 1.84
LBX1P52954 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC26.52■■□□□ 1.84
LBX1P52954 MIR4651-201ENST00000582622 73 ntBASIC26.52■■□□□ 1.84
LBX1P52954 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC26.51■■□□□ 1.83
LBX1P52954 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
LBX1P52954 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC26.51■■□□□ 1.83
LBX1P52954 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
LBX1P52954 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.83
LBX1P52954 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC26.51■■□□□ 1.83
LBX1P52954 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC26.51■■□□□ 1.83
LBX1P52954 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
LBX1P52954 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
LBX1P52954 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
LBX1P52954 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
LBX1P52954 GPX1P1-201ENST00000388829 606 ntBASIC26.5■■□□□ 1.83
LBX1P52954 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
LBX1P52954 IGHV3-19-201ENST00000521488 291 ntBASIC26.5■■□□□ 1.83
LBX1P52954 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC26.5■■□□□ 1.83
LBX1P52954 AC008687.6-201ENST00000596318 630 ntBASIC26.5■■□□□ 1.83
LBX1P52954 BID-214ENST00000617586 542 ntTSL 5 BASIC26.5■■□□□ 1.83
LBX1P52954 C17orf82-201ENST00000623772 1530 ntBASIC26.49■■□□□ 1.83
LBX1P52954 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
LBX1P52954 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
LBX1P52954 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
LBX1P52954 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC26.49■■□□□ 1.83
LBX1P52954 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC26.49■■□□□ 1.83
LBX1P52954 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC26.49■■□□□ 1.83
LBX1P52954 FAM201B-201ENST00000458407 597 ntBASIC26.49■■□□□ 1.83
LBX1P52954 KRT18P61-201ENST00000585825 1298 ntBASIC26.49■■□□□ 1.83
LBX1P52954 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC26.49■■□□□ 1.83
LBX1P52954 AC009086.3-201ENST00000623486 1008 ntBASIC26.49■■□□□ 1.83
LBX1P52954 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC26.48■■□□□ 1.83
LBX1P52954 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
LBX1P52954 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
LBX1P52954 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
LBX1P52954 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
LBX1P52954 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
LBX1P52954 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC26.47■■□□□ 1.83
LBX1P52954 HSCB-202ENST00000398941 955 ntTSL 2 BASIC26.47■■□□□ 1.83
LBX1P52954 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC26.47■■□□□ 1.83
LBX1P52954 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
LBX1P52954 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC26.47■■□□□ 1.83
LBX1P52954 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC26.47■■□□□ 1.83
LBX1P52954 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
LBX1P52954 STX7-201ENST00000367937 1090 ntTSL 5 BASIC26.46■■□□□ 1.83
LBX1P52954 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC26.46■■□□□ 1.83
LBX1P52954 AC142086.2-201ENST00000569753 217 ntBASIC26.46■■□□□ 1.83
LBX1P52954 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC26.46■■□□□ 1.83
LBX1P52954 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms