Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
HMGA2P52926 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HMGA2P52926 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
HMGA2P52926 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.97■□□□□ 0.95
HMGA2P52926 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
HMGA2P52926 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
HMGA2P52926 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.97■□□□□ 0.95
HMGA2P52926 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HMGA2P52926 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
HMGA2P52926 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HMGA2P52926 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
HMGA2P52926 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HMGA2P52926 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
HMGA2P52926 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HMGA2P52926 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HMGA2P52926 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.96■□□□□ 0.95
HMGA2P52926 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
HMGA2P52926 AC087393.1-201ENST00000582896 145 ntBASIC20.96■□□□□ 0.95
HMGA2P52926 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HMGA2P52926 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.95■□□□□ 0.94
HMGA2P52926 CLDN5-201ENST00000403084 2357 ntBASIC20.95■□□□□ 0.94
HMGA2P52926 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
HMGA2P52926 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HMGA2P52926 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HMGA2P52926 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
HMGA2P52926 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HMGA2P52926 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
HMGA2P52926 C1orf229-201ENST00000623686 2258 ntBASIC20.95■□□□□ 0.94
HMGA2P52926 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HMGA2P52926 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
HMGA2P52926 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.95■□□□□ 0.94
HMGA2P52926 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HMGA2P52926 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.94■□□□□ 0.94
HMGA2P52926 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
HMGA2P52926 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
HMGA2P52926 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
HMGA2P52926 MIR4449-201ENST00000578365 66 ntBASIC20.94■□□□□ 0.94
HMGA2P52926 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HMGA2P52926 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.94■□□□□ 0.94
HMGA2P52926 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
HMGA2P52926 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
HMGA2P52926 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
HMGA2P52926 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
HMGA2P52926 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HMGA2P52926 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.94■□□□□ 0.94
HMGA2P52926 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HMGA2P52926 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMGA2P52926 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMGA2P52926 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.93■□□□□ 0.94
HMGA2P52926 EP400NL-214ENST00000641289 2402 ntBASIC20.93■□□□□ 0.94
HMGA2P52926 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMGA2P52926 AC018755.3-202ENST00000596210 929 ntBASIC20.93■□□□□ 0.94
HMGA2P52926 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMGA2P52926 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HMGA2P52926 AL022069.1-201ENST00000568025 1636 ntBASIC20.93■□□□□ 0.94
HMGA2P52926 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
HMGA2P52926 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HMGA2P52926 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.92■□□□□ 0.94
HMGA2P52926 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HMGA2P52926 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HMGA2P52926 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
HMGA2P52926 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HMGA2P52926 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HMGA2P52926 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HMGA2P52926 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
HMGA2P52926 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.92■□□□□ 0.94
HMGA2P52926 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
HMGA2P52926 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HMGA2P52926 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
HMGA2P52926 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
HMGA2P52926 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
HMGA2P52926 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.91■□□□□ 0.94
HMGA2P52926 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HMGA2P52926 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
HMGA2P52926 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
HMGA2P52926 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HMGA2P52926 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HMGA2P52926 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HMGA2P52926 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HMGA2P52926 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HMGA2P52926 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
HMGA2P52926 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.9■□□□□ 0.94
HMGA2P52926 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
HMGA2P52926 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
HMGA2P52926 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HMGA2P52926 SPCS2P3-201ENST00000500401 656 ntBASIC20.9■□□□□ 0.94
HMGA2P52926 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
HMGA2P52926 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
HMGA2P52926 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
HMGA2P52926 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
HMGA2P52926 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
HMGA2P52926 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
HMGA2P52926 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
HMGA2P52926 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HMGA2P52926 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
HMGA2P52926 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HMGA2P52926 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.89■□□□□ 0.93
HMGA2P52926 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
HMGA2P52926 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HMGA2P52926 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms