Protein–RNA interactions for Protein: P39748

FEN1, Flap endonuclease 1, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FEN1P39748 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
FEN1P39748 RARRES2P1-201ENST00000474487 481 ntBASIC21.68■■□□□ 1.06
FEN1P39748 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.68■■□□□ 1.06
FEN1P39748 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
FEN1P39748 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
FEN1P39748 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
FEN1P39748 AF131216.4-201ENST00000638924 1588 ntBASIC21.68■■□□□ 1.06
FEN1P39748 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
FEN1P39748 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.67■■□□□ 1.06
FEN1P39748 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
FEN1P39748 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
FEN1P39748 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.67■■□□□ 1.06
FEN1P39748 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
FEN1P39748 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
FEN1P39748 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.67■■□□□ 1.06
FEN1P39748 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
FEN1P39748 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
FEN1P39748 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
FEN1P39748 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
FEN1P39748 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.66■■□□□ 1.06
FEN1P39748 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.66■■□□□ 1.06
FEN1P39748 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
FEN1P39748 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.66■■□□□ 1.06
FEN1P39748 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
FEN1P39748 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
FEN1P39748 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
FEN1P39748 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
FEN1P39748 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
FEN1P39748 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
FEN1P39748 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
FEN1P39748 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.65■■□□□ 1.06
FEN1P39748 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.65■■□□□ 1.06
FEN1P39748 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.65■■□□□ 1.06
FEN1P39748 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.65■■□□□ 1.06
FEN1P39748 AL022069.1-201ENST00000568025 1636 ntBASIC21.65■■□□□ 1.06
FEN1P39748 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
FEN1P39748 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
FEN1P39748 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
FEN1P39748 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.64■■□□□ 1.05
FEN1P39748 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
FEN1P39748 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
FEN1P39748 AC131274.2-201ENST00000580697 1507 ntBASIC21.64■■□□□ 1.05
FEN1P39748 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
FEN1P39748 AC133561.1-201ENST00000568600 2415 ntBASIC21.64■■□□□ 1.05
FEN1P39748 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
FEN1P39748 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
FEN1P39748 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
FEN1P39748 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
FEN1P39748 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
FEN1P39748 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
FEN1P39748 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.63■■□□□ 1.05
FEN1P39748 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
FEN1P39748 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.63■■□□□ 1.05
FEN1P39748 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
FEN1P39748 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
FEN1P39748 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
FEN1P39748 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
FEN1P39748 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
FEN1P39748 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.62■■□□□ 1.05
FEN1P39748 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.62■■□□□ 1.05
FEN1P39748 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.62■■□□□ 1.05
FEN1P39748 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
FEN1P39748 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.62■■□□□ 1.05
FEN1P39748 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.62■■□□□ 1.05
FEN1P39748 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
FEN1P39748 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
FEN1P39748 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
FEN1P39748 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
FEN1P39748 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
FEN1P39748 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
FEN1P39748 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
FEN1P39748 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.61■■□□□ 1.05
FEN1P39748 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
FEN1P39748 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
FEN1P39748 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
FEN1P39748 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.6■■□□□ 1.05
FEN1P39748 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.6■■□□□ 1.05
FEN1P39748 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
FEN1P39748 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
FEN1P39748 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
FEN1P39748 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
FEN1P39748 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.6■■□□□ 1.05
FEN1P39748 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
FEN1P39748 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.6■■□□□ 1.05
FEN1P39748 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
FEN1P39748 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
FEN1P39748 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
FEN1P39748 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
FEN1P39748 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
FEN1P39748 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
FEN1P39748 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
FEN1P39748 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.59■■□□□ 1.05
FEN1P39748 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.59■■□□□ 1.05
FEN1P39748 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
FEN1P39748 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.59■■□□□ 1.05
FEN1P39748 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
FEN1P39748 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.58■■□□□ 1.05
FEN1P39748 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
FEN1P39748 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
FEN1P39748 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.58■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms