Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC28.58■■■□□ 2.16
PDE6BP35913 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC28.57■■■□□ 2.16
PDE6BP35913 AC006455.2-201ENST00000429931 906 ntBASIC28.57■■■□□ 2.16
PDE6BP35913 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC28.57■■■□□ 2.16
PDE6BP35913 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC28.57■■■□□ 2.16
PDE6BP35913 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC28.57■■■□□ 2.16
PDE6BP35913 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC28.57■■■□□ 2.16
PDE6BP35913 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
PDE6BP35913 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
PDE6BP35913 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
PDE6BP35913 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC28.56■■■□□ 2.16
PDE6BP35913 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC28.56■■■□□ 2.16
PDE6BP35913 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC28.56■■■□□ 2.16
PDE6BP35913 MIR3181-201ENST00000578512 73 ntBASIC28.56■■■□□ 2.16
PDE6BP35913 AC022517.1-201ENST00000592429 346 ntBASIC28.56■■■□□ 2.16
PDE6BP35913 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC28.56■■■□□ 2.16
PDE6BP35913 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
PDE6BP35913 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
PDE6BP35913 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC28.55■■■□□ 2.16
PDE6BP35913 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
PDE6BP35913 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC28.55■■■□□ 2.16
PDE6BP35913 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC28.55■■■□□ 2.16
PDE6BP35913 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC28.55■■■□□ 2.16
PDE6BP35913 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC28.55■■■□□ 2.16
PDE6BP35913 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC28.55■■■□□ 2.16
PDE6BP35913 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC28.55■■■□□ 2.16
PDE6BP35913 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC28.55■■■□□ 2.16
PDE6BP35913 AL022069.1-201ENST00000568025 1636 ntBASIC28.54■■■□□ 2.16
PDE6BP35913 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
PDE6BP35913 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC28.54■■■□□ 2.16
PDE6BP35913 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
PDE6BP35913 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC28.54■■■□□ 2.16
PDE6BP35913 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC28.54■■■□□ 2.16
PDE6BP35913 IKBKGP1-201ENST00000612193 1073 ntBASIC28.54■■■□□ 2.16
PDE6BP35913 AC009086.3-201ENST00000623486 1008 ntBASIC28.54■■■□□ 2.16
PDE6BP35913 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC28.53■■■□□ 2.16
PDE6BP35913 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC28.53■■■□□ 2.16
PDE6BP35913 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC28.53■■■□□ 2.16
PDE6BP35913 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC28.53■■■□□ 2.16
PDE6BP35913 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
PDE6BP35913 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC28.53■■■□□ 2.16
PDE6BP35913 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC28.53■■■□□ 2.16
PDE6BP35913 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
PDE6BP35913 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC28.53■■■□□ 2.16
PDE6BP35913 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC28.52■■■□□ 2.16
PDE6BP35913 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
PDE6BP35913 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
PDE6BP35913 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC28.52■■■□□ 2.16
PDE6BP35913 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
PDE6BP35913 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC28.52■■■□□ 2.16
PDE6BP35913 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC28.51■■■□□ 2.16
PDE6BP35913 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
PDE6BP35913 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC28.51■■■□□ 2.15
PDE6BP35913 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC28.51■■■□□ 2.15
PDE6BP35913 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC28.51■■■□□ 2.15
PDE6BP35913 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
PDE6BP35913 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC28.51■■■□□ 2.15
PDE6BP35913 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC28.5■■■□□ 2.15
PDE6BP35913 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
PDE6BP35913 SNX3-202ENST00000349379 890 ntTSL 2 BASIC28.5■■■□□ 2.15
PDE6BP35913 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC28.5■■■□□ 2.15
PDE6BP35913 KRT18P5-201ENST00000436075 1291 ntBASIC28.5■■■□□ 2.15
PDE6BP35913 YBX1P1-201ENST00000445822 960 ntBASIC28.5■■■□□ 2.15
PDE6BP35913 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC28.5■■■□□ 2.15
PDE6BP35913 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC28.5■■■□□ 2.15
PDE6BP35913 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC28.5■■■□□ 2.15
PDE6BP35913 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
PDE6BP35913 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC28.49■■■□□ 2.15
PDE6BP35913 HACD1-201ENST00000326961 773 ntTSL 2 BASIC28.49■■■□□ 2.15
PDE6BP35913 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
PDE6BP35913 AL137784.2-201ENST00000607332 1000 ntBASIC28.49■■■□□ 2.15
PDE6BP35913 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC28.48■■■□□ 2.15
PDE6BP35913 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC28.48■■■□□ 2.15
PDE6BP35913 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
PDE6BP35913 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
PDE6BP35913 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC28.47■■■□□ 2.15
PDE6BP35913 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
PDE6BP35913 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC28.47■■■□□ 2.15
PDE6BP35913 AC126544.1-201ENST00000580842 1059 ntBASIC28.47■■■□□ 2.15
PDE6BP35913 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
PDE6BP35913 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
PDE6BP35913 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC28.46■■■□□ 2.15
PDE6BP35913 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC28.46■■■□□ 2.15
PDE6BP35913 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
PDE6BP35913 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC28.46■■■□□ 2.15
PDE6BP35913 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
PDE6BP35913 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC28.46■■■□□ 2.15
PDE6BP35913 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC28.46■■■□□ 2.15
PDE6BP35913 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC28.45■■■□□ 2.15
PDE6BP35913 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC28.45■■■□□ 2.15
PDE6BP35913 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
PDE6BP35913 VGF-203ENST00000611537 1622 ntTSL 5 BASIC28.45■■■□□ 2.14
PDE6BP35913 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC28.45■■■□□ 2.14
PDE6BP35913 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
PDE6BP35913 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC28.45■■■□□ 2.14
PDE6BP35913 AL031602.1-201ENST00000633169 911 ntBASIC28.45■■■□□ 2.14
PDE6BP35913 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC28.45■■■□□ 2.14
PDE6BP35913 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
PDE6BP35913 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC28.44■■■□□ 2.14
PDE6BP35913 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms