Protein–RNA interactions for Protein: P31040

SDHA, Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP31040 BHLHE23-202ENST00000612929 1109 ntBASIC20.5■□□□□ 0.87
SDHAP31040 AC074183.2-201ENST00000623112 922 ntBASIC20.5■□□□□ 0.87
SDHAP31040 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SDHAP31040 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.5■□□□□ 0.87
SDHAP31040 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SDHAP31040 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SDHAP31040 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SDHAP31040 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
SDHAP31040 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SDHAP31040 AC133561.1-201ENST00000568600 2415 ntBASIC20.49■□□□□ 0.87
SDHAP31040 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SDHAP31040 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.49■□□□□ 0.87
SDHAP31040 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.49■□□□□ 0.87
SDHAP31040 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SDHAP31040 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
SDHAP31040 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.49■□□□□ 0.87
SDHAP31040 AC004987.1-201ENST00000428627 508 ntBASIC20.49■□□□□ 0.87
SDHAP31040 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SDHAP31040 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SDHAP31040 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.48■□□□□ 0.87
SDHAP31040 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
SDHAP31040 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SDHAP31040 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SDHAP31040 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SDHAP31040 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SDHAP31040 AC131274.2-201ENST00000580697 1507 ntBASIC20.48■□□□□ 0.87
SDHAP31040 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
SDHAP31040 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SDHAP31040 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SDHAP31040 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
SDHAP31040 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.47■□□□□ 0.87
SDHAP31040 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.47■□□□□ 0.87
SDHAP31040 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.47■□□□□ 0.87
SDHAP31040 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SDHAP31040 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.47■□□□□ 0.87
SDHAP31040 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SDHAP31040 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SDHAP31040 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
SDHAP31040 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SDHAP31040 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
SDHAP31040 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SDHAP31040 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
SDHAP31040 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.45■□□□□ 0.86
SDHAP31040 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
SDHAP31040 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
SDHAP31040 TSPY13P-201ENST00000338964 914 ntBASIC20.45■□□□□ 0.86
SDHAP31040 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.45■□□□□ 0.86
SDHAP31040 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
SDHAP31040 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
SDHAP31040 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
SDHAP31040 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SDHAP31040 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
SDHAP31040 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SDHAP31040 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.44■□□□□ 0.86
SDHAP31040 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.44■□□□□ 0.86
SDHAP31040 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.44■□□□□ 0.86
SDHAP31040 AC120024.1-201ENST00000562672 995 ntBASIC20.44■□□□□ 0.86
SDHAP31040 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.44■□□□□ 0.86
SDHAP31040 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.44■□□□□ 0.86
SDHAP31040 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SDHAP31040 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
SDHAP31040 ANOS2P-203ENST00000472227 1816 ntBASIC20.43■□□□□ 0.86
SDHAP31040 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
SDHAP31040 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
SDHAP31040 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SDHAP31040 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
SDHAP31040 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.43■□□□□ 0.86
SDHAP31040 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
SDHAP31040 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.43■□□□□ 0.86
SDHAP31040 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
SDHAP31040 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SDHAP31040 ALDH1A3-203ENST00000557963 1670 ntBASIC20.42■□□□□ 0.86
SDHAP31040 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.42■□□□□ 0.86
SDHAP31040 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SDHAP31040 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.42■□□□□ 0.86
SDHAP31040 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SDHAP31040 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SDHAP31040 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
SDHAP31040 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
SDHAP31040 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SDHAP31040 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SDHAP31040 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SDHAP31040 KRT18P24-201ENST00000344739 1156 ntBASIC20.41■□□□□ 0.86
SDHAP31040 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.41■□□□□ 0.86
SDHAP31040 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.41■□□□□ 0.86
SDHAP31040 THA1P-201ENST00000590384 1145 ntBASIC20.41■□□□□ 0.86
SDHAP31040 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
SDHAP31040 PVT1_1.1-201ENST00000615125 194 ntBASIC20.41■□□□□ 0.86
SDHAP31040 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.41■□□□□ 0.86
SDHAP31040 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.41■□□□□ 0.86
SDHAP31040 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.41■□□□□ 0.86
SDHAP31040 AC092068.2-201ENST00000590491 1708 ntBASIC20.41■□□□□ 0.86
SDHAP31040 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SDHAP31040 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SDHAP31040 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.41■□□□□ 0.86
SDHAP31040 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SDHAP31040 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SDHAP31040 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SDHAP31040 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.4■□□□□ 0.86
SDHAP31040 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms