Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.72■■□□□ 1.07
MMP11P24347 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.72■■□□□ 1.07
MMP11P24347 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
MMP11P24347 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.72■■□□□ 1.07
MMP11P24347 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.72■■□□□ 1.07
MMP11P24347 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.72■■□□□ 1.07
MMP11P24347 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.72■■□□□ 1.07
MMP11P24347 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.72■■□□□ 1.07
MMP11P24347 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MMP11P24347 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
MMP11P24347 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.71■■□□□ 1.07
MMP11P24347 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
MMP11P24347 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.71■■□□□ 1.07
MMP11P24347 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.71■■□□□ 1.07
MMP11P24347 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.71■■□□□ 1.07
MMP11P24347 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MMP11P24347 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MMP11P24347 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
MMP11P24347 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.07
MMP11P24347 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
MMP11P24347 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.7■■□□□ 1.06
MMP11P24347 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MMP11P24347 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.7■■□□□ 1.06
MMP11P24347 AL136116.3-201ENST00000402907 1138 ntBASIC21.7■■□□□ 1.06
MMP11P24347 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
MMP11P24347 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
MMP11P24347 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.7■■□□□ 1.06
MMP11P24347 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MMP11P24347 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
MMP11P24347 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
MMP11P24347 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.7■■□□□ 1.06
MMP11P24347 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
MMP11P24347 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
MMP11P24347 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MMP11P24347 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
MMP11P24347 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
MMP11P24347 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
MMP11P24347 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.69■■□□□ 1.06
MMP11P24347 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
MMP11P24347 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MMP11P24347 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
MMP11P24347 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.69■■□□□ 1.06
MMP11P24347 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MMP11P24347 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MMP11P24347 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MMP11P24347 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MMP11P24347 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MMP11P24347 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MMP11P24347 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MMP11P24347 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
MMP11P24347 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
MMP11P24347 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.68■■□□□ 1.06
MMP11P24347 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.68■■□□□ 1.06
MMP11P24347 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
MMP11P24347 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.68■■□□□ 1.06
MMP11P24347 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.68■■□□□ 1.06
MMP11P24347 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MMP11P24347 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
MMP11P24347 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
MMP11P24347 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
MMP11P24347 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
MMP11P24347 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.67■■□□□ 1.06
MMP11P24347 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.67■■□□□ 1.06
MMP11P24347 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.67■■□□□ 1.06
MMP11P24347 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.67■■□□□ 1.06
MMP11P24347 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
MMP11P24347 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.67■■□□□ 1.06
MMP11P24347 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.67■■□□□ 1.06
MMP11P24347 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
MMP11P24347 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
MMP11P24347 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
MMP11P24347 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
MMP11P24347 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
MMP11P24347 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.66■■□□□ 1.06
MMP11P24347 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
MMP11P24347 AC004448.1-201ENST00000458332 883 ntBASIC21.66■■□□□ 1.06
MMP11P24347 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.66■■□□□ 1.06
MMP11P24347 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.66■■□□□ 1.06
MMP11P24347 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.66■■□□□ 1.06
MMP11P24347 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.66■■□□□ 1.06
MMP11P24347 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
MMP11P24347 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.65■■□□□ 1.06
MMP11P24347 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
MMP11P24347 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
MMP11P24347 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
MMP11P24347 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.06
MMP11P24347 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.64■■□□□ 1.06
MMP11P24347 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
MMP11P24347 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
MMP11P24347 AL512631.2-201ENST00000604634 923 ntBASIC21.64■■□□□ 1.05
MMP11P24347 MIR4466-201ENST00000606121 54 ntBASIC21.64■■□□□ 1.05
MMP11P24347 MIR6089-201ENST00000616698 64 ntBASIC21.64■■□□□ 1.05
MMP11P24347 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.64■■□□□ 1.05
MMP11P24347 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
MMP11P24347 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
MMP11P24347 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.63■■□□□ 1.05
MMP11P24347 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.63■■□□□ 1.05
MMP11P24347 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
MMP11P24347 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.63■■□□□ 1.05
MMP11P24347 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms