Protein–RNA interactions for Protein: P19438

TNFRSF1A, Tumor necrosis factor receptor superfamily member 1A, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1AP19438 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.39■□□□□ 0.69
TNFRSF1AP19438 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TNFRSF1AP19438 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.39■□□□□ 0.69
TNFRSF1AP19438 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.39■□□□□ 0.69
TNFRSF1AP19438 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TNFRSF1AP19438 AC131212.1-201ENST00000613771 668 ntBASIC19.39■□□□□ 0.69
TNFRSF1AP19438 AC005703.6-201ENST00000623265 1329 ntBASIC19.39■□□□□ 0.69
TNFRSF1AP19438 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.39■□□□□ 0.69
TNFRSF1AP19438 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.39■□□□□ 0.69
TNFRSF1AP19438 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TNFRSF1AP19438 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.39■□□□□ 0.69
TNFRSF1AP19438 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TNFRSF1AP19438 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
TNFRSF1AP19438 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TNFRSF1AP19438 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.38■□□□□ 0.69
TNFRSF1AP19438 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TNFRSF1AP19438 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.38■□□□□ 0.69
TNFRSF1AP19438 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TNFRSF1AP19438 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TNFRSF1AP19438 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TNFRSF1AP19438 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TNFRSF1AP19438 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.38■□□□□ 0.69
TNFRSF1AP19438 AC135731.1-201ENST00000569415 2548 ntBASIC19.38■□□□□ 0.69
TNFRSF1AP19438 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TNFRSF1AP19438 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TNFRSF1AP19438 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TNFRSF1AP19438 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.37■□□□□ 0.69
TNFRSF1AP19438 AL356740.2-201ENST00000601559 647 ntBASIC19.37■□□□□ 0.69
TNFRSF1AP19438 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.37■□□□□ 0.69
TNFRSF1AP19438 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.37■□□□□ 0.69
TNFRSF1AP19438 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TNFRSF1AP19438 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TNFRSF1AP19438 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TNFRSF1AP19438 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TNFRSF1AP19438 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
TNFRSF1AP19438 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TNFRSF1AP19438 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.36■□□□□ 0.69
TNFRSF1AP19438 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.36■□□□□ 0.69
TNFRSF1AP19438 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TNFRSF1AP19438 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
TNFRSF1AP19438 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.35■□□□□ 0.69
TNFRSF1AP19438 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.35■□□□□ 0.69
TNFRSF1AP19438 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.35■□□□□ 0.69
TNFRSF1AP19438 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.35■□□□□ 0.69
TNFRSF1AP19438 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.35■□□□□ 0.69
TNFRSF1AP19438 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.35■□□□□ 0.69
TNFRSF1AP19438 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.35■□□□□ 0.69
TNFRSF1AP19438 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TNFRSF1AP19438 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TNFRSF1AP19438 AL139125.2-201ENST00000623134 1869 ntBASIC19.35■□□□□ 0.69
TNFRSF1AP19438 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TNFRSF1AP19438 LINC00543-201ENST00000567234 1845 ntBASIC19.35■□□□□ 0.69
TNFRSF1AP19438 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TNFRSF1AP19438 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
TNFRSF1AP19438 LINC01124-201ENST00000409786 2117 ntBASIC19.34■□□□□ 0.69
TNFRSF1AP19438 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TNFRSF1AP19438 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TNFRSF1AP19438 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.34■□□□□ 0.69
TNFRSF1AP19438 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TNFRSF1AP19438 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
TNFRSF1AP19438 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TNFRSF1AP19438 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TNFRSF1AP19438 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.34■□□□□ 0.69
TNFRSF1AP19438 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TNFRSF1AP19438 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TNFRSF1AP19438 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TNFRSF1AP19438 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC19.34■□□□□ 0.69
TNFRSF1AP19438 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TNFRSF1AP19438 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TNFRSF1AP19438 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.33■□□□□ 0.68
TNFRSF1AP19438 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TNFRSF1AP19438 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
TNFRSF1AP19438 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
TNFRSF1AP19438 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
TNFRSF1AP19438 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TNFRSF1AP19438 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.32■□□□□ 0.68
TNFRSF1AP19438 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TNFRSF1AP19438 AL117332.1-201ENST00000622628 974 ntBASIC19.32■□□□□ 0.68
TNFRSF1AP19438 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.32■□□□□ 0.68
TNFRSF1AP19438 ALDH1A3-203ENST00000557963 1670 ntBASIC19.32■□□□□ 0.68
TNFRSF1AP19438 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TNFRSF1AP19438 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
TNFRSF1AP19438 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNFRSF1AP19438 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNFRSF1AP19438 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNFRSF1AP19438 MIR3621-201ENST00000580529 85 ntBASIC19.31■□□□□ 0.68
TNFRSF1AP19438 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.31■□□□□ 0.68
TNFRSF1AP19438 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNFRSF1AP19438 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNFRSF1AP19438 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.31■□□□□ 0.68
TNFRSF1AP19438 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.31■□□□□ 0.68
TNFRSF1AP19438 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNFRSF1AP19438 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TNFRSF1AP19438 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.31■□□□□ 0.68
TNFRSF1AP19438 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TNFRSF1AP19438 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TNFRSF1AP19438 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TNFRSF1AP19438 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TNFRSF1AP19438 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.3■□□□□ 0.68
TNFRSF1AP19438 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms