Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PRKCAP17252 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.04■□□□□ 0.96
PRKCAP17252 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
PRKCAP17252 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PRKCAP17252 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.04■□□□□ 0.96
PRKCAP17252 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PRKCAP17252 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
PRKCAP17252 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.04■□□□□ 0.96
PRKCAP17252 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PRKCAP17252 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
PRKCAP17252 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.04■□□□□ 0.96
PRKCAP17252 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PRKCAP17252 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.03■□□□□ 0.96
PRKCAP17252 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PRKCAP17252 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
PRKCAP17252 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PRKCAP17252 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PRKCAP17252 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PRKCAP17252 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PRKCAP17252 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
PRKCAP17252 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.02■□□□□ 0.96
PRKCAP17252 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.02■□□□□ 0.96
PRKCAP17252 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
PRKCAP17252 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PRKCAP17252 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.02■□□□□ 0.96
PRKCAP17252 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.95
PRKCAP17252 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
PRKCAP17252 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
PRKCAP17252 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PRKCAP17252 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PRKCAP17252 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PRKCAP17252 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.01■□□□□ 0.95
PRKCAP17252 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.01■□□□□ 0.95
PRKCAP17252 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PRKCAP17252 AL024507.2-201ENST00000606070 2574 ntBASIC21.01■□□□□ 0.95
PRKCAP17252 AF131216.4-201ENST00000638924 1588 ntBASIC21.01■□□□□ 0.95
PRKCAP17252 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21■□□□□ 0.95
PRKCAP17252 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
PRKCAP17252 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PRKCAP17252 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
PRKCAP17252 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21■□□□□ 0.95
PRKCAP17252 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21■□□□□ 0.95
PRKCAP17252 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
PRKCAP17252 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.99■□□□□ 0.95
PRKCAP17252 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PRKCAP17252 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PRKCAP17252 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PRKCAP17252 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PRKCAP17252 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRKCAP17252 AC141586.4-201ENST00000624558 1573 ntBASIC20.98■□□□□ 0.95
PRKCAP17252 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PRKCAP17252 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRKCAP17252 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRKCAP17252 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.98■□□□□ 0.95
PRKCAP17252 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRKCAP17252 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.98■□□□□ 0.95
PRKCAP17252 AL451085.2-201ENST00000605085 799 ntBASIC20.98■□□□□ 0.95
PRKCAP17252 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRKCAP17252 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRKCAP17252 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.98■□□□□ 0.95
PRKCAP17252 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.98■□□□□ 0.95
PRKCAP17252 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRKCAP17252 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.97■□□□□ 0.95
PRKCAP17252 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRKCAP17252 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.97■□□□□ 0.95
PRKCAP17252 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
PRKCAP17252 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRKCAP17252 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
PRKCAP17252 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PRKCAP17252 AC137630.3-201ENST00000607245 391 ntBASIC20.97■□□□□ 0.95
PRKCAP17252 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRKCAP17252 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRKCAP17252 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRKCAP17252 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRKCAP17252 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRKCAP17252 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRKCAP17252 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.97■□□□□ 0.95
PRKCAP17252 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRKCAP17252 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PRKCAP17252 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRKCAP17252 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRKCAP17252 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRKCAP17252 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.96■□□□□ 0.95
PRKCAP17252 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRKCAP17252 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRKCAP17252 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRKCAP17252 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
PRKCAP17252 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.96■□□□□ 0.95
PRKCAP17252 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRKCAP17252 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRKCAP17252 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRKCAP17252 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRKCAP17252 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.96■□□□□ 0.95
PRKCAP17252 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRKCAP17252 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
PRKCAP17252 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.95
PRKCAP17252 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.95
PRKCAP17252 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.95■□□□□ 0.94
PRKCAP17252 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.95■□□□□ 0.94
PRKCAP17252 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms