Protein–RNA interactions for Protein: P11836

MS4A1, B-lymphocyte antigen CD20, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A1P11836 AC010980.1-201ENST00000587192 1142 ntBASIC29.38■■■□□ 2.29
MS4A1P11836 AL022069.1-201ENST00000568025 1636 ntBASIC29.38■■■□□ 2.29
MS4A1P11836 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC29.37■■■□□ 2.29
MS4A1P11836 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC29.37■■■□□ 2.29
MS4A1P11836 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
MS4A1P11836 BEX3-202ENST00000372634 753 ntTSL 2 BASIC29.37■■■□□ 2.29
MS4A1P11836 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
MS4A1P11836 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC29.37■■■□□ 2.29
MS4A1P11836 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC29.37■■■□□ 2.29
MS4A1P11836 AC120024.1-201ENST00000562672 995 ntBASIC29.37■■■□□ 2.29
MS4A1P11836 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC29.37■■■□□ 2.29
MS4A1P11836 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC29.37■■■□□ 2.29
MS4A1P11836 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
MS4A1P11836 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
MS4A1P11836 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
MS4A1P11836 ME2-208ENST00000638937 2471 ntTSL 5 BASIC29.36■■■□□ 2.29
MS4A1P11836 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC29.36■■■□□ 2.29
MS4A1P11836 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
MS4A1P11836 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
MS4A1P11836 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC29.35■■■□□ 2.29
MS4A1P11836 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC29.35■■■□□ 2.29
MS4A1P11836 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
MS4A1P11836 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC29.35■■■□□ 2.29
MS4A1P11836 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC29.35■■■□□ 2.29
MS4A1P11836 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
MS4A1P11836 ABCB10P4-201ENST00000566803 2184 ntBASIC29.35■■■□□ 2.29
MS4A1P11836 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
MS4A1P11836 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
MS4A1P11836 AL033527.3-201ENST00000566366 1196 ntBASIC29.34■■■□□ 2.29
MS4A1P11836 MIR4508-201ENST00000584178 70 ntBASIC29.34■■■□□ 2.29
MS4A1P11836 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC29.34■■■□□ 2.29
MS4A1P11836 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC29.34■■■□□ 2.29
MS4A1P11836 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC29.33■■■□□ 2.29
MS4A1P11836 STK32C-205ENST00000456004 607 ntTSL 2 BASIC29.33■■■□□ 2.29
MS4A1P11836 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC29.33■■■□□ 2.29
MS4A1P11836 THA1P-201ENST00000590384 1145 ntBASIC29.33■■■□□ 2.29
MS4A1P11836 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
MS4A1P11836 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC29.33■■■□□ 2.29
MS4A1P11836 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
MS4A1P11836 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC29.33■■■□□ 2.29
MS4A1P11836 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC29.33■■■□□ 2.29
MS4A1P11836 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC29.33■■■□□ 2.29
MS4A1P11836 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC29.32■■■□□ 2.28
MS4A1P11836 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC29.32■■■□□ 2.28
MS4A1P11836 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC29.32■■■□□ 2.28
MS4A1P11836 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
MS4A1P11836 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC29.32■■■□□ 2.28
MS4A1P11836 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC29.32■■■□□ 2.28
MS4A1P11836 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC29.32■■■□□ 2.28
MS4A1P11836 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC29.31■■■□□ 2.28
MS4A1P11836 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
MS4A1P11836 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC29.31■■■□□ 2.28
MS4A1P11836 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC29.31■■■□□ 2.28
MS4A1P11836 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
MS4A1P11836 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC29.31■■■□□ 2.28
MS4A1P11836 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
MS4A1P11836 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
MS4A1P11836 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC29.3■■■□□ 2.28
MS4A1P11836 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC29.3■■■□□ 2.28
MS4A1P11836 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC29.3■■■□□ 2.28
MS4A1P11836 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC29.3■■■□□ 2.28
MS4A1P11836 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
MS4A1P11836 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC29.3■■■□□ 2.28
MS4A1P11836 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
MS4A1P11836 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
MS4A1P11836 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC29.29■■■□□ 2.28
MS4A1P11836 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC29.29■■■□□ 2.28
MS4A1P11836 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC29.29■■■□□ 2.28
MS4A1P11836 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC29.28■■■□□ 2.28
MS4A1P11836 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
MS4A1P11836 LBH-205ENST00000407930 756 ntTSL 2 BASIC29.28■■■□□ 2.28
MS4A1P11836 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC29.28■■■□□ 2.28
MS4A1P11836 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC29.28■■■□□ 2.28
MS4A1P11836 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
MS4A1P11836 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
MS4A1P11836 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
MS4A1P11836 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
MS4A1P11836 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
MS4A1P11836 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
MS4A1P11836 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
MS4A1P11836 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
MS4A1P11836 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC29.27■■■□□ 2.28
MS4A1P11836 MIR4281-201ENST00000580852 62 ntBASIC29.27■■■□□ 2.28
MS4A1P11836 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
MS4A1P11836 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
MS4A1P11836 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC29.26■■■□□ 2.27
MS4A1P11836 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
MS4A1P11836 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC29.26■■■□□ 2.27
MS4A1P11836 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
MS4A1P11836 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC29.26■■■□□ 2.27
MS4A1P11836 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
MS4A1P11836 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
MS4A1P11836 AC131274.2-201ENST00000580697 1507 ntBASIC29.25■■■□□ 2.27
MS4A1P11836 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC29.25■■■□□ 2.27
MS4A1P11836 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC29.25■■■□□ 2.27
MS4A1P11836 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC29.25■■■□□ 2.27
MS4A1P11836 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC29.25■■■□□ 2.27
MS4A1P11836 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC29.25■■■□□ 2.27
MS4A1P11836 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
MS4A1P11836 NFE2L3P1-201ENST00000588207 1959 ntBASIC29.25■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms