Protein–RNA interactions for Protein: P05388

RPLP0, 60S acidic ribosomal protein P0, humanhuman

Known RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPLP0P05388 SRD5A1P1-201ENST00000442297 786 ntBASIC22.35■■□□□ 1.17
RPLP0P05388 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
RPLP0P05388 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RPLP0P05388 UNC93B3-201ENST00000308076 687 ntBASIC22.34■■□□□ 1.17
RPLP0P05388 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC22.34■■□□□ 1.17
RPLP0P05388 AC106739.1-201ENST00000617035 715 ntBASIC22.34■■□□□ 1.17
RPLP0P05388 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC22.34■■□□□ 1.17
RPLP0P05388 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
RPLP0P05388 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
RPLP0P05388 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC22.33■■□□□ 1.17
RPLP0P05388 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RPLP0P05388 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
RPLP0P05388 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC22.33■■□□□ 1.17
RPLP0P05388 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
RPLP0P05388 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
RPLP0P05388 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
RPLP0P05388 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
RPLP0P05388 RARA-203ENST00000394086 2008 ntTSL 2 BASIC22.32■■□□□ 1.16
RPLP0P05388 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
RPLP0P05388 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC22.32■■□□□ 1.16
RPLP0P05388 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RPLP0P05388 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC22.32■■□□□ 1.16
RPLP0P05388 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RPLP0P05388 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RPLP0P05388 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RPLP0P05388 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
RPLP0P05388 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
RPLP0P05388 AL136162.1-201ENST00000607711 1078 ntBASIC22.31■■□□□ 1.16
RPLP0P05388 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RPLP0P05388 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
RPLP0P05388 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
RPLP0P05388 THRA-202ENST00000394121 2260 ntTSL 2 BASIC22.31■■□□□ 1.16
RPLP0P05388 AC005703.6-201ENST00000623265 1329 ntBASIC22.31■■□□□ 1.16
RPLP0P05388 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC22.31■■□□□ 1.16
RPLP0P05388 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC22.3■■□□□ 1.16
RPLP0P05388 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
RPLP0P05388 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC22.3■■□□□ 1.16
RPLP0P05388 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RPLP0P05388 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RPLP0P05388 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RPLP0P05388 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RPLP0P05388 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RPLP0P05388 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RPLP0P05388 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RPLP0P05388 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
RPLP0P05388 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RPLP0P05388 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC22.29■■□□□ 1.16
RPLP0P05388 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RPLP0P05388 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC22.29■■□□□ 1.16
RPLP0P05388 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RPLP0P05388 AC142381.2-201ENST00000566120 298 ntBASIC22.29■■□□□ 1.16
RPLP0P05388 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
RPLP0P05388 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC22.29■■□□□ 1.16
RPLP0P05388 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC22.28■■□□□ 1.16
RPLP0P05388 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RPLP0P05388 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC22.28■■□□□ 1.16
RPLP0P05388 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RPLP0P05388 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RPLP0P05388 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC22.28■■□□□ 1.16
RPLP0P05388 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC22.27■■□□□ 1.16
RPLP0P05388 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RPLP0P05388 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RPLP0P05388 EBPL-204ENST00000378272 766 ntTSL 3 BASIC22.27■■□□□ 1.16
RPLP0P05388 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RPLP0P05388 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC22.27■■□□□ 1.16
RPLP0P05388 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
RPLP0P05388 AC135279.3-201ENST00000610945 1311 ntBASIC22.27■■□□□ 1.16
RPLP0P05388 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RPLP0P05388 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC22.26■■□□□ 1.15
RPLP0P05388 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RPLP0P05388 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RPLP0P05388 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RPLP0P05388 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RPLP0P05388 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
RPLP0P05388 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC22.26■■□□□ 1.15
RPLP0P05388 CEBPA-AS1-201ENST00000592982 2198 ntBASIC22.26■■□□□ 1.15
RPLP0P05388 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RPLP0P05388 GATM-206ENST00000558336 1522 ntTSL 2 BASIC22.26■■□□□ 1.15
RPLP0P05388 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
RPLP0P05388 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RPLP0P05388 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
RPLP0P05388 GUK1-205ENST00000366722 850 ntTSL 3 BASIC22.25■■□□□ 1.15
RPLP0P05388 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC22.25■■□□□ 1.15
RPLP0P05388 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
RPLP0P05388 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC22.25■■□□□ 1.15
RPLP0P05388 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
RPLP0P05388 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RPLP0P05388 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
RPLP0P05388 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RPLP0P05388 REST-206ENST00000612429 1376 ntTSL 5 BASIC22.25■■□□□ 1.15
RPLP0P05388 REST-207ENST00000616975 1370 ntTSL 5 BASIC22.25■■□□□ 1.15
RPLP0P05388 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RPLP0P05388 SLC6A10P-202ENST00000431994 2058 ntBASIC22.24■■□□□ 1.15
RPLP0P05388 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC22.24■■□□□ 1.15
RPLP0P05388 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RPLP0P05388 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RPLP0P05388 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RPLP0P05388 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC22.24■■□□□ 1.15
RPLP0P05388 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RPLP0P05388 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms