Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
P04436 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.96■□□□□ 0.95
P04436 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.95■□□□□ 0.94
P04436 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
P04436 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
P04436 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
P04436 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
P04436 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
P04436 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.95■□□□□ 0.94
P04436 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
P04436 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.95■□□□□ 0.94
P04436 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
P04436 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
P04436 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
P04436 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
P04436 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.94■□□□□ 0.94
P04436 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
P04436 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
P04436 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
P04436 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.94■□□□□ 0.94
P04436 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
P04436 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
P04436 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
P04436 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.94■□□□□ 0.94
P04436 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.94■□□□□ 0.94
P04436 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.94■□□□□ 0.94
P04436 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
P04436 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
P04436 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.94■□□□□ 0.94
P04436 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
P04436 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
P04436 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
P04436 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.93■□□□□ 0.94
P04436 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.93■□□□□ 0.94
P04436 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
P04436 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
P04436 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
P04436 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
P04436 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
P04436 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
P04436 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
P04436 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
P04436 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
P04436 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
P04436 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
P04436 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
P04436 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
P04436 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
P04436 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
P04436 AL512631.2-201ENST00000604634 923 ntBASIC20.91■□□□□ 0.94
P04436 MIR4466-201ENST00000606121 54 ntBASIC20.91■□□□□ 0.94
P04436 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
P04436 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
P04436 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
P04436 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
P04436 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
P04436 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
P04436 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
P04436 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
P04436 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
P04436 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.9■□□□□ 0.94
P04436 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
P04436 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
P04436 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
P04436 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.89■□□□□ 0.94
P04436 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.94
P04436 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
P04436 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
P04436 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
P04436 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
P04436 AC135731.1-201ENST00000569415 2548 ntBASIC20.89■□□□□ 0.93
P04436 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.89■□□□□ 0.93
P04436 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
P04436 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
P04436 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
P04436 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.88■□□□□ 0.93
P04436 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
P04436 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
P04436 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.88■□□□□ 0.93
P04436 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
P04436 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.87■□□□□ 0.93
P04436 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
P04436 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
P04436 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.87■□□□□ 0.93
P04436 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
P04436 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
P04436 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
P04436 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
P04436 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
P04436 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.86■□□□□ 0.93
P04436 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
P04436 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.86■□□□□ 0.93
P04436 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
P04436 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
P04436 SRD5A1P1-201ENST00000442297 786 ntBASIC20.86■□□□□ 0.93
P04436 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
P04436 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
P04436 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
P04436 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.86■□□□□ 0.93
P04436 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms