Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
ABCA1O95477 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.1■□□□□ 0.65
ABCA1O95477 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.1■□□□□ 0.65
ABCA1O95477 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ABCA1O95477 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.1■□□□□ 0.65
ABCA1O95477 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
ABCA1O95477 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.1■□□□□ 0.65
ABCA1O95477 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ABCA1O95477 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ABCA1O95477 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ABCA1O95477 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ABCA1O95477 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.09■□□□□ 0.65
ABCA1O95477 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ABCA1O95477 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ABCA1O95477 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.09■□□□□ 0.65
ABCA1O95477 MIR4767-201ENST00000582827 78 ntBASIC19.09■□□□□ 0.65
ABCA1O95477 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ABCA1O95477 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ABCA1O95477 AC092803.2-201ENST00000564287 1899 ntBASIC19.09■□□□□ 0.65
ABCA1O95477 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
ABCA1O95477 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ABCA1O95477 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ABCA1O95477 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ABCA1O95477 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ABCA1O95477 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ABCA1O95477 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
ABCA1O95477 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
ABCA1O95477 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.08■□□□□ 0.65
ABCA1O95477 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.08■□□□□ 0.65
ABCA1O95477 AC011298.3-201ENST00000615796 283 ntBASIC19.08■□□□□ 0.65
ABCA1O95477 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC19.08■□□□□ 0.65
ABCA1O95477 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
ABCA1O95477 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ABCA1O95477 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
ABCA1O95477 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ABCA1O95477 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
ABCA1O95477 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
ABCA1O95477 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ABCA1O95477 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
ABCA1O95477 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ABCA1O95477 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ABCA1O95477 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ABCA1O95477 IRS3P-201ENST00000223076 1006 ntBASIC19.07■□□□□ 0.64
ABCA1O95477 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.07■□□□□ 0.64
ABCA1O95477 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
ABCA1O95477 AC020928.2-201ENST00000588717 2197 ntBASIC19.07■□□□□ 0.64
ABCA1O95477 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.07■□□□□ 0.64
ABCA1O95477 AC004448.1-201ENST00000458332 883 ntBASIC19.07■□□□□ 0.64
ABCA1O95477 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ABCA1O95477 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
ABCA1O95477 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ABCA1O95477 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC19.06■□□□□ 0.64
ABCA1O95477 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ABCA1O95477 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
ABCA1O95477 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.06■□□□□ 0.64
ABCA1O95477 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ABCA1O95477 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
ABCA1O95477 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
ABCA1O95477 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ABCA1O95477 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.05■□□□□ 0.64
ABCA1O95477 AL138724.1-201ENST00000606771 1088 ntBASIC19.05■□□□□ 0.64
ABCA1O95477 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.05■□□□□ 0.64
ABCA1O95477 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.05■□□□□ 0.64
ABCA1O95477 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ABCA1O95477 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.05■□□□□ 0.64
ABCA1O95477 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ABCA1O95477 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ABCA1O95477 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ABCA1O95477 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ABCA1O95477 AC091060.1-201ENST00000623524 1766 ntBASIC19.05■□□□□ 0.64
ABCA1O95477 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
ABCA1O95477 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
ABCA1O95477 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC19.04■□□□□ 0.64
ABCA1O95477 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
ABCA1O95477 AC008764.7-201ENST00000593779 1081 ntBASIC19.04■□□□□ 0.64
ABCA1O95477 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ABCA1O95477 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.04■□□□□ 0.64
ABCA1O95477 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
ABCA1O95477 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ABCA1O95477 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ABCA1O95477 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
ABCA1O95477 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.04■□□□□ 0.64
ABCA1O95477 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.04■□□□□ 0.64
ABCA1O95477 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ABCA1O95477 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ABCA1O95477 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ABCA1O95477 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
ABCA1O95477 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.04■□□□□ 0.64
ABCA1O95477 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ABCA1O95477 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ABCA1O95477 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ABCA1O95477 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.03■□□□□ 0.64
ABCA1O95477 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ABCA1O95477 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ABCA1O95477 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ABCA1O95477 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ABCA1O95477 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.03■□□□□ 0.64
ABCA1O95477 AC027682.1-201ENST00000562846 899 ntBASIC19.03■□□□□ 0.64
ABCA1O95477 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
ABCA1O95477 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms