Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC23.11■■□□□ 1.29
USP1O94782 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC23.11■■□□□ 1.29
USP1O94782 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
USP1O94782 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
USP1O94782 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
USP1O94782 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC23.11■■□□□ 1.29
USP1O94782 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
USP1O94782 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC23.1■■□□□ 1.29
USP1O94782 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
USP1O94782 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
USP1O94782 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
USP1O94782 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
USP1O94782 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
USP1O94782 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
USP1O94782 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
USP1O94782 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
USP1O94782 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC23.09■■□□□ 1.29
USP1O94782 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
USP1O94782 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
USP1O94782 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC23.09■■□□□ 1.29
USP1O94782 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
USP1O94782 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
USP1O94782 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC23.09■■□□□ 1.29
USP1O94782 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
USP1O94782 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
USP1O94782 AL022069.1-201ENST00000568025 1636 ntBASIC23.08■■□□□ 1.29
USP1O94782 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
USP1O94782 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
USP1O94782 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC23.08■■□□□ 1.29
USP1O94782 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
USP1O94782 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
USP1O94782 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
USP1O94782 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
USP1O94782 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
USP1O94782 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
USP1O94782 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
USP1O94782 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.28
USP1O94782 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC23.08■■□□□ 1.28
USP1O94782 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
USP1O94782 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.08■■□□□ 1.28
USP1O94782 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
USP1O94782 EI24-213ENST00000618552 1747 ntTSL 5 BASIC23.08■■□□□ 1.28
USP1O94782 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC23.07■■□□□ 1.28
USP1O94782 TSPY13P-201ENST00000338964 914 ntBASIC23.07■■□□□ 1.28
USP1O94782 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
USP1O94782 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
USP1O94782 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
USP1O94782 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
USP1O94782 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
USP1O94782 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
USP1O94782 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
USP1O94782 IDNK-201ENST00000376417 511 ntTSL 5 BASIC23.06■■□□□ 1.28
USP1O94782 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
USP1O94782 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC23.06■■□□□ 1.28
USP1O94782 BHLHE23-202ENST00000612929 1109 ntBASIC23.06■■□□□ 1.28
USP1O94782 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC23.06■■□□□ 1.28
USP1O94782 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC23.06■■□□□ 1.28
USP1O94782 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC23.06■■□□□ 1.28
USP1O94782 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
USP1O94782 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
USP1O94782 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC23.06■■□□□ 1.28
USP1O94782 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
USP1O94782 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
USP1O94782 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC23.05■■□□□ 1.28
USP1O94782 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
USP1O94782 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
USP1O94782 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
USP1O94782 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
USP1O94782 AC074183.2-201ENST00000623112 922 ntBASIC23.05■■□□□ 1.28
USP1O94782 GAK-223ENST00000628912 497 ntTSL 5 BASIC23.05■■□□□ 1.28
USP1O94782 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC23.05■■□□□ 1.28
USP1O94782 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
USP1O94782 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
USP1O94782 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
USP1O94782 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC23.04■■□□□ 1.28
USP1O94782 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
USP1O94782 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC23.04■■□□□ 1.28
USP1O94782 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
USP1O94782 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
USP1O94782 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
USP1O94782 NFE2L3P1-201ENST00000588207 1959 ntBASIC23.03■■□□□ 1.28
USP1O94782 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
USP1O94782 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
USP1O94782 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
USP1O94782 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
USP1O94782 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
USP1O94782 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
USP1O94782 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
USP1O94782 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
USP1O94782 AC131274.2-201ENST00000580697 1507 ntBASIC23.03■■□□□ 1.28
USP1O94782 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
USP1O94782 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC23.02■■□□□ 1.28
USP1O94782 AL033527.3-201ENST00000566366 1196 ntBASIC23.02■■□□□ 1.28
USP1O94782 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
USP1O94782 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
USP1O94782 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.27
USP1O94782 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
USP1O94782 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC23.01■■□□□ 1.27
USP1O94782 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC23.01■■□□□ 1.27
USP1O94782 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC23.01■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms