Protein–RNA interactions for Protein: O75631

UPK3A, Uroplakin-3a, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3AO75631 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.5■□□□□ 0.87
UPK3AO75631 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
UPK3AO75631 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.5■□□□□ 0.87
UPK3AO75631 AF131216.4-201ENST00000638924 1588 ntBASIC20.5■□□□□ 0.87
UPK3AO75631 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
UPK3AO75631 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.5■□□□□ 0.87
UPK3AO75631 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
UPK3AO75631 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
UPK3AO75631 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
UPK3AO75631 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
UPK3AO75631 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
UPK3AO75631 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.49■□□□□ 0.87
UPK3AO75631 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.49■□□□□ 0.87
UPK3AO75631 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
UPK3AO75631 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.49■□□□□ 0.87
UPK3AO75631 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
UPK3AO75631 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.48■□□□□ 0.87
UPK3AO75631 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.48■□□□□ 0.87
UPK3AO75631 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.48■□□□□ 0.87
UPK3AO75631 AC009299.2-201ENST00000482477 511 ntBASIC20.48■□□□□ 0.87
UPK3AO75631 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
UPK3AO75631 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
UPK3AO75631 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
UPK3AO75631 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
UPK3AO75631 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
UPK3AO75631 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
UPK3AO75631 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
UPK3AO75631 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
UPK3AO75631 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.47■□□□□ 0.87
UPK3AO75631 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.47■□□□□ 0.87
UPK3AO75631 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
UPK3AO75631 AC137630.3-201ENST00000607245 391 ntBASIC20.47■□□□□ 0.87
UPK3AO75631 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
UPK3AO75631 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
UPK3AO75631 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
UPK3AO75631 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
UPK3AO75631 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
UPK3AO75631 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
UPK3AO75631 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
UPK3AO75631 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
UPK3AO75631 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
UPK3AO75631 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
UPK3AO75631 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
UPK3AO75631 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
UPK3AO75631 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.45■□□□□ 0.86
UPK3AO75631 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
UPK3AO75631 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.45■□□□□ 0.86
UPK3AO75631 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.44■□□□□ 0.86
UPK3AO75631 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
UPK3AO75631 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
UPK3AO75631 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
UPK3AO75631 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.44■□□□□ 0.86
UPK3AO75631 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.44■□□□□ 0.86
UPK3AO75631 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
UPK3AO75631 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.44■□□□□ 0.86
UPK3AO75631 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
UPK3AO75631 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.43■□□□□ 0.86
UPK3AO75631 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
UPK3AO75631 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
UPK3AO75631 BX664725.1-201ENST00000438252 379 ntBASIC20.43■□□□□ 0.86
UPK3AO75631 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
UPK3AO75631 AL035685.1-201ENST00000636663 812 ntBASIC20.43■□□□□ 0.86
UPK3AO75631 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
UPK3AO75631 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
UPK3AO75631 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
UPK3AO75631 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
UPK3AO75631 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
UPK3AO75631 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
UPK3AO75631 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
UPK3AO75631 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
UPK3AO75631 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
UPK3AO75631 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
UPK3AO75631 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.42■□□□□ 0.86
UPK3AO75631 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
UPK3AO75631 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
UPK3AO75631 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
UPK3AO75631 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
UPK3AO75631 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
UPK3AO75631 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
UPK3AO75631 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
UPK3AO75631 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.41■□□□□ 0.86
UPK3AO75631 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
UPK3AO75631 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.41■□□□□ 0.86
UPK3AO75631 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
UPK3AO75631 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
UPK3AO75631 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.41■□□□□ 0.86
UPK3AO75631 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
UPK3AO75631 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
UPK3AO75631 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
UPK3AO75631 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
UPK3AO75631 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.41■□□□□ 0.86
UPK3AO75631 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.41■□□□□ 0.86
UPK3AO75631 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
UPK3AO75631 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
UPK3AO75631 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
UPK3AO75631 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
UPK3AO75631 AC239859.2-201ENST00000444165 318 ntBASIC20.4■□□□□ 0.86
UPK3AO75631 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
UPK3AO75631 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.4■□□□□ 0.86
UPK3AO75631 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms