Protein–RNA interactions for Protein: O60293

ZFC3H1, Zinc finger C3H1 domain-containing protein, humanhuman

Known RBP Predictions only

Length 1,989 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFC3H1O60293 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
ZFC3H1O60293 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC22.71■■□□□ 1.23
ZFC3H1O60293 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
ZFC3H1O60293 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC22.71■■□□□ 1.23
ZFC3H1O60293 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC22.7■■□□□ 1.23
ZFC3H1O60293 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.23
ZFC3H1O60293 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
ZFC3H1O60293 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
ZFC3H1O60293 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
ZFC3H1O60293 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
ZFC3H1O60293 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
ZFC3H1O60293 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC22.7■■□□□ 1.22
ZFC3H1O60293 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC22.7■■□□□ 1.22
ZFC3H1O60293 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
ZFC3H1O60293 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
ZFC3H1O60293 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
ZFC3H1O60293 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC22.69■■□□□ 1.22
ZFC3H1O60293 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
ZFC3H1O60293 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC22.69■■□□□ 1.22
ZFC3H1O60293 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
ZFC3H1O60293 LSM7-203ENST00000585409 512 ntTSL 2 BASIC22.69■■□□□ 1.22
ZFC3H1O60293 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC22.69■■□□□ 1.22
ZFC3H1O60293 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
ZFC3H1O60293 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC22.69■■□□□ 1.22
ZFC3H1O60293 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
ZFC3H1O60293 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
ZFC3H1O60293 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
ZFC3H1O60293 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC22.69■■□□□ 1.22
ZFC3H1O60293 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
ZFC3H1O60293 LINC01124-201ENST00000409786 2117 ntBASIC22.68■■□□□ 1.22
ZFC3H1O60293 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
ZFC3H1O60293 LSM4-201ENST00000252816 986 ntTSL 2 BASIC22.68■■□□□ 1.22
ZFC3H1O60293 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC22.68■■□□□ 1.22
ZFC3H1O60293 CLTA-206ENST00000466396 695 ntTSL 2 BASIC22.68■■□□□ 1.22
ZFC3H1O60293 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC22.68■■□□□ 1.22
ZFC3H1O60293 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
ZFC3H1O60293 LINC00543-201ENST00000567234 1845 ntBASIC22.68■■□□□ 1.22
ZFC3H1O60293 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
ZFC3H1O60293 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC22.67■■□□□ 1.22
ZFC3H1O60293 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC22.67■■□□□ 1.22
ZFC3H1O60293 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC22.67■■□□□ 1.22
ZFC3H1O60293 CLTA-210ENST00000540080 989 ntTSL 2 BASIC22.67■■□□□ 1.22
ZFC3H1O60293 TRIR-202ENST00000588213 841 ntTSL 3 BASIC22.67■■□□□ 1.22
ZFC3H1O60293 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
ZFC3H1O60293 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
ZFC3H1O60293 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC22.67■■□□□ 1.22
ZFC3H1O60293 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
ZFC3H1O60293 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
ZFC3H1O60293 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC22.67■■□□□ 1.22
ZFC3H1O60293 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
ZFC3H1O60293 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
ZFC3H1O60293 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
ZFC3H1O60293 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
ZFC3H1O60293 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC22.67■■□□□ 1.22
ZFC3H1O60293 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC22.67■■□□□ 1.22
ZFC3H1O60293 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
ZFC3H1O60293 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC22.66■■□□□ 1.22
ZFC3H1O60293 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
ZFC3H1O60293 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC22.66■■□□□ 1.22
ZFC3H1O60293 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
ZFC3H1O60293 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
ZFC3H1O60293 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
ZFC3H1O60293 MIR4466-201ENST00000606121 54 ntBASIC22.66■■□□□ 1.22
ZFC3H1O60293 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC22.66■■□□□ 1.22
ZFC3H1O60293 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
ZFC3H1O60293 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
ZFC3H1O60293 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
ZFC3H1O60293 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC22.66■■□□□ 1.22
ZFC3H1O60293 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC22.66■■□□□ 1.22
ZFC3H1O60293 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
ZFC3H1O60293 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ZFC3H1O60293 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ZFC3H1O60293 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
ZFC3H1O60293 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ZFC3H1O60293 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ZFC3H1O60293 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
ZFC3H1O60293 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC22.65■■□□□ 1.22
ZFC3H1O60293 MIR3621-201ENST00000580529 85 ntBASIC22.65■■□□□ 1.22
ZFC3H1O60293 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC22.65■■□□□ 1.22
ZFC3H1O60293 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
ZFC3H1O60293 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
ZFC3H1O60293 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
ZFC3H1O60293 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
ZFC3H1O60293 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
ZFC3H1O60293 AC133561.1-201ENST00000568600 2415 ntBASIC22.64■■□□□ 1.21
ZFC3H1O60293 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
ZFC3H1O60293 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
ZFC3H1O60293 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ZFC3H1O60293 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ZFC3H1O60293 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
ZFC3H1O60293 CD37-213ENST00000598095 1598 ntTSL 2 BASIC22.63■■□□□ 1.21
ZFC3H1O60293 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
ZFC3H1O60293 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
ZFC3H1O60293 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
ZFC3H1O60293 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
ZFC3H1O60293 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
ZFC3H1O60293 CD72-202ENST00000378430 585 ntTSL 3 BASIC22.62■■□□□ 1.21
ZFC3H1O60293 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
ZFC3H1O60293 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC22.62■■□□□ 1.21
ZFC3H1O60293 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms