Protein–RNA interactions for Protein: O43638

FOXS1, Forkhead box protein S1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXS1O43638 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
FOXS1O43638 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
FOXS1O43638 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
FOXS1O43638 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
FOXS1O43638 LINC01124-201ENST00000409786 2117 ntBASIC21.67■■□□□ 1.06
FOXS1O43638 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
FOXS1O43638 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
FOXS1O43638 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.67■■□□□ 1.06
FOXS1O43638 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
FOXS1O43638 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.67■■□□□ 1.06
FOXS1O43638 AL356740.2-201ENST00000601559 647 ntBASIC21.67■■□□□ 1.06
FOXS1O43638 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
FOXS1O43638 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
FOXS1O43638 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
FOXS1O43638 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
FOXS1O43638 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
FOXS1O43638 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
FOXS1O43638 AC005703.6-201ENST00000623265 1329 ntBASIC21.66■■□□□ 1.06
FOXS1O43638 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
FOXS1O43638 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
FOXS1O43638 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.66■■□□□ 1.06
FOXS1O43638 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
FOXS1O43638 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.66■■□□□ 1.06
FOXS1O43638 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.66■■□□□ 1.06
FOXS1O43638 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
FOXS1O43638 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
FOXS1O43638 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
FOXS1O43638 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.66■■□□□ 1.06
FOXS1O43638 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
FOXS1O43638 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.65■■□□□ 1.06
FOXS1O43638 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.65■■□□□ 1.06
FOXS1O43638 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
FOXS1O43638 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
FOXS1O43638 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
FOXS1O43638 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
FOXS1O43638 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC21.65■■□□□ 1.06
FOXS1O43638 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.65■■□□□ 1.06
FOXS1O43638 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.65■■□□□ 1.06
FOXS1O43638 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
FOXS1O43638 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
FOXS1O43638 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.65■■□□□ 1.06
FOXS1O43638 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
FOXS1O43638 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
FOXS1O43638 LINC00543-201ENST00000567234 1845 ntBASIC21.64■■□□□ 1.06
FOXS1O43638 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
FOXS1O43638 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
FOXS1O43638 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.64■■□□□ 1.05
FOXS1O43638 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.64■■□□□ 1.05
FOXS1O43638 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.64■■□□□ 1.05
FOXS1O43638 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.64■■□□□ 1.05
FOXS1O43638 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
FOXS1O43638 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
FOXS1O43638 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
FOXS1O43638 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
FOXS1O43638 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
FOXS1O43638 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.63■■□□□ 1.05
FOXS1O43638 AC131281.2-201ENST00000520478 145 ntBASIC21.63■■□□□ 1.05
FOXS1O43638 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.63■■□□□ 1.05
FOXS1O43638 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.63■■□□□ 1.05
FOXS1O43638 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
FOXS1O43638 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
FOXS1O43638 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
FOXS1O43638 AC141586.4-201ENST00000624558 1573 ntBASIC21.62■■□□□ 1.05
FOXS1O43638 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.62■■□□□ 1.05
FOXS1O43638 ALDH1A3-203ENST00000557963 1670 ntBASIC21.62■■□□□ 1.05
FOXS1O43638 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
FOXS1O43638 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.61■■□□□ 1.05
FOXS1O43638 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
FOXS1O43638 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
FOXS1O43638 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
FOXS1O43638 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
FOXS1O43638 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.61■■□□□ 1.05
FOXS1O43638 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.61■■□□□ 1.05
FOXS1O43638 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.61■■□□□ 1.05
FOXS1O43638 AL512631.2-201ENST00000604634 923 ntBASIC21.61■■□□□ 1.05
FOXS1O43638 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
FOXS1O43638 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.61■■□□□ 1.05
FOXS1O43638 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
FOXS1O43638 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
FOXS1O43638 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
FOXS1O43638 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.6■■□□□ 1.05
FOXS1O43638 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
FOXS1O43638 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
FOXS1O43638 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.6■■□□□ 1.05
FOXS1O43638 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
FOXS1O43638 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.6■■□□□ 1.05
FOXS1O43638 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
FOXS1O43638 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
FOXS1O43638 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
FOXS1O43638 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
FOXS1O43638 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
FOXS1O43638 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.59■■□□□ 1.05
FOXS1O43638 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
FOXS1O43638 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
FOXS1O43638 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
FOXS1O43638 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
FOXS1O43638 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
FOXS1O43638 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
FOXS1O43638 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.59■■□□□ 1.05
FOXS1O43638 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 866.7 ms