Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
ABCC4O15439 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC29.36■■■□□ 2.29
ABCC4O15439 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
ABCC4O15439 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC29.36■■■□□ 2.29
ABCC4O15439 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
ABCC4O15439 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
ABCC4O15439 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
ABCC4O15439 CD37-213ENST00000598095 1598 ntTSL 2 BASIC29.36■■■□□ 2.29
ABCC4O15439 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
ABCC4O15439 AC110285.6-201ENST00000617652 491 ntBASIC29.36■■■□□ 2.29
ABCC4O15439 AC131274.2-201ENST00000580697 1507 ntBASIC29.36■■■□□ 2.29
ABCC4O15439 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC29.35■■■□□ 2.29
ABCC4O15439 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC29.35■■■□□ 2.29
ABCC4O15439 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC29.35■■■□□ 2.29
ABCC4O15439 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC29.34■■■□□ 2.29
ABCC4O15439 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC29.34■■■□□ 2.29
ABCC4O15439 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC29.34■■■□□ 2.29
ABCC4O15439 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC29.34■■■□□ 2.29
ABCC4O15439 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC29.34■■■□□ 2.29
ABCC4O15439 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
ABCC4O15439 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
ABCC4O15439 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
ABCC4O15439 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC29.33■■■□□ 2.29
ABCC4O15439 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC29.33■■■□□ 2.29
ABCC4O15439 QDPR-206ENST00000508623 601 ntTSL 3 BASIC29.33■■■□□ 2.29
ABCC4O15439 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC29.33■■■□□ 2.29
ABCC4O15439 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC29.33■■■□□ 2.29
ABCC4O15439 CLTA-210ENST00000540080 989 ntTSL 2 BASIC29.33■■■□□ 2.29
ABCC4O15439 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
ABCC4O15439 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC29.33■■■□□ 2.29
ABCC4O15439 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
ABCC4O15439 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC29.33■■■□□ 2.29
ABCC4O15439 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
ABCC4O15439 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC29.32■■■□□ 2.28
ABCC4O15439 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC29.32■■■□□ 2.28
ABCC4O15439 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
ABCC4O15439 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC29.32■■■□□ 2.28
ABCC4O15439 AL356740.2-201ENST00000601559 647 ntBASIC29.32■■■□□ 2.28
ABCC4O15439 AL512631.2-201ENST00000604634 923 ntBASIC29.32■■■□□ 2.28
ABCC4O15439 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
ABCC4O15439 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC29.31■■■□□ 2.28
ABCC4O15439 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC29.31■■■□□ 2.28
ABCC4O15439 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
ABCC4O15439 AC004812.2-201ENST00000611079 2094 ntBASIC29.3■■■□□ 2.28
ABCC4O15439 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
ABCC4O15439 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
ABCC4O15439 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC29.3■■■□□ 2.28
ABCC4O15439 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
ABCC4O15439 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
ABCC4O15439 LBH-205ENST00000407930 756 ntTSL 2 BASIC29.29■■■□□ 2.28
ABCC4O15439 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC29.29■■■□□ 2.28
ABCC4O15439 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC29.29■■■□□ 2.28
ABCC4O15439 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC29.29■■■□□ 2.28
ABCC4O15439 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC29.29■■■□□ 2.28
ABCC4O15439 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC29.28■■■□□ 2.28
ABCC4O15439 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC29.28■■■□□ 2.28
ABCC4O15439 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC29.28■■■□□ 2.28
ABCC4O15439 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC29.28■■■□□ 2.28
ABCC4O15439 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC29.27■■■□□ 2.28
ABCC4O15439 CD72-202ENST00000378430 585 ntTSL 3 BASIC29.27■■■□□ 2.28
ABCC4O15439 AC096631.2-201ENST00000436136 790 ntBASIC29.27■■■□□ 2.28
ABCC4O15439 RASSF1-AS1-201ENST00000629828 790 ntBASIC29.27■■■□□ 2.28
ABCC4O15439 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
ABCC4O15439 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC29.27■■■□□ 2.28
ABCC4O15439 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC29.27■■■□□ 2.28
ABCC4O15439 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
ABCC4O15439 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC29.26■■■□□ 2.28
ABCC4O15439 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
ABCC4O15439 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
ABCC4O15439 AK3-203ENST00000447596 705 ntTSL 2 BASIC29.26■■■□□ 2.27
ABCC4O15439 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC29.26■■■□□ 2.27
ABCC4O15439 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
ABCC4O15439 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC29.26■■■□□ 2.27
ABCC4O15439 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
ABCC4O15439 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC29.26■■■□□ 2.27
ABCC4O15439 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC29.26■■■□□ 2.27
ABCC4O15439 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
ABCC4O15439 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC29.25■■■□□ 2.27
ABCC4O15439 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC29.25■■■□□ 2.27
ABCC4O15439 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
ABCC4O15439 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
ABCC4O15439 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
ABCC4O15439 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
ABCC4O15439 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
ABCC4O15439 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
ABCC4O15439 SHD-204ENST00000599689 1729 ntTSL 5 BASIC29.24■■■□□ 2.27
ABCC4O15439 AL161729.1-201ENST00000604104 1402 ntBASIC29.24■■■□□ 2.27
ABCC4O15439 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC29.23■■■□□ 2.27
ABCC4O15439 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
ABCC4O15439 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC29.23■■■□□ 2.27
ABCC4O15439 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC29.23■■■□□ 2.27
ABCC4O15439 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
ABCC4O15439 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC29.23■■■□□ 2.27
ABCC4O15439 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
ABCC4O15439 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC29.22■■■□□ 2.27
ABCC4O15439 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC29.22■■■□□ 2.27
ABCC4O15439 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
ABCC4O15439 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
ABCC4O15439 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC29.22■■■□□ 2.27
ABCC4O15439 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms