Protein–RNA interactions for Protein: O14788

TNFSF11, Tumor necrosis factor ligand superfamily member 11, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11O14788 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TNFSF11O14788 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
TNFSF11O14788 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TNFSF11O14788 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
TNFSF11O14788 LINC00543-201ENST00000567234 1845 ntBASIC20.57■□□□□ 0.88
TNFSF11O14788 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
TNFSF11O14788 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TNFSF11O14788 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TNFSF11O14788 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TNFSF11O14788 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.57■□□□□ 0.88
TNFSF11O14788 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.57■□□□□ 0.88
TNFSF11O14788 MIR6724-1-201ENST00000616420 92 ntBASIC20.57■□□□□ 0.88
TNFSF11O14788 MIR6724-2-201ENST00000616483 92 ntBASIC20.57■□□□□ 0.88
TNFSF11O14788 MIR6724-4-201ENST00000617390 92 ntBASIC20.57■□□□□ 0.88
TNFSF11O14788 MIR6724-3-201ENST00000622482 92 ntBASIC20.57■□□□□ 0.88
TNFSF11O14788 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TNFSF11O14788 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TNFSF11O14788 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TNFSF11O14788 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.56■□□□□ 0.88
TNFSF11O14788 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.56■□□□□ 0.88
TNFSF11O14788 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.56■□□□□ 0.88
TNFSF11O14788 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TNFSF11O14788 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.56■□□□□ 0.88
TNFSF11O14788 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
TNFSF11O14788 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TNFSF11O14788 AC141586.4-201ENST00000624558 1573 ntBASIC20.55■□□□□ 0.88
TNFSF11O14788 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TNFSF11O14788 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.55■□□□□ 0.88
TNFSF11O14788 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TNFSF11O14788 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TNFSF11O14788 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.55■□□□□ 0.88
TNFSF11O14788 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TNFSF11O14788 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.55■□□□□ 0.88
TNFSF11O14788 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TNFSF11O14788 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.55■□□□□ 0.88
TNFSF11O14788 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.55■□□□□ 0.88
TNFSF11O14788 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TNFSF11O14788 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TNFSF11O14788 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.55■□□□□ 0.88
TNFSF11O14788 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TNFSF11O14788 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
TNFSF11O14788 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TNFSF11O14788 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.54■□□□□ 0.88
TNFSF11O14788 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.54■□□□□ 0.88
TNFSF11O14788 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TNFSF11O14788 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.54■□□□□ 0.88
TNFSF11O14788 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TNFSF11O14788 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
TNFSF11O14788 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
TNFSF11O14788 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
TNFSF11O14788 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TNFSF11O14788 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TNFSF11O14788 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
TNFSF11O14788 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNFSF11O14788 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNFSF11O14788 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNFSF11O14788 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.53■□□□□ 0.88
TNFSF11O14788 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.53■□□□□ 0.88
TNFSF11O14788 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNFSF11O14788 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.53■□□□□ 0.88
TNFSF11O14788 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.53■□□□□ 0.88
TNFSF11O14788 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNFSF11O14788 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNFSF11O14788 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TNFSF11O14788 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TNFSF11O14788 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TNFSF11O14788 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TNFSF11O14788 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.52■□□□□ 0.88
TNFSF11O14788 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.52■□□□□ 0.88
TNFSF11O14788 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.52■□□□□ 0.88
TNFSF11O14788 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.52■□□□□ 0.88
TNFSF11O14788 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
TNFSF11O14788 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.51■□□□□ 0.87
TNFSF11O14788 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.51■□□□□ 0.87
TNFSF11O14788 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.51■□□□□ 0.87
TNFSF11O14788 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TNFSF11O14788 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TNFSF11O14788 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TNFSF11O14788 ALDH1A3-203ENST00000557963 1670 ntBASIC20.51■□□□□ 0.87
TNFSF11O14788 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.51■□□□□ 0.87
TNFSF11O14788 AC005703.6-201ENST00000623265 1329 ntBASIC20.51■□□□□ 0.87
TNFSF11O14788 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TNFSF11O14788 AC004812.2-201ENST00000611079 2094 ntBASIC20.5■□□□□ 0.87
TNFSF11O14788 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNFSF11O14788 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.5■□□□□ 0.87
TNFSF11O14788 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.5■□□□□ 0.87
TNFSF11O14788 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNFSF11O14788 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.5■□□□□ 0.87
TNFSF11O14788 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNFSF11O14788 AL117332.1-201ENST00000622628 974 ntBASIC20.5■□□□□ 0.87
TNFSF11O14788 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
TNFSF11O14788 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNFSF11O14788 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TNFSF11O14788 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.49■□□□□ 0.87
TNFSF11O14788 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
TNFSF11O14788 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TNFSF11O14788 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TNFSF11O14788 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.49■□□□□ 0.87
TNFSF11O14788 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.49■□□□□ 0.87
TNFSF11O14788 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms