Protein–RNA interactions for Protein: A4FU49

SH3D21, SH3 domain-containing protein 21, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21A4FU49 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
SH3D21A4FU49 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SH3D21A4FU49 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SH3D21A4FU49 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.14■□□□□ 0.97
SH3D21A4FU49 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SH3D21A4FU49 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
SH3D21A4FU49 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SH3D21A4FU49 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SH3D21A4FU49 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SH3D21A4FU49 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
SH3D21A4FU49 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SH3D21A4FU49 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SH3D21A4FU49 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SH3D21A4FU49 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
SH3D21A4FU49 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SH3D21A4FU49 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SH3D21A4FU49 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.13■□□□□ 0.97
SH3D21A4FU49 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SH3D21A4FU49 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
SH3D21A4FU49 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SH3D21A4FU49 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SH3D21A4FU49 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SH3D21A4FU49 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SH3D21A4FU49 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
SH3D21A4FU49 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SH3D21A4FU49 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
SH3D21A4FU49 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SH3D21A4FU49 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SH3D21A4FU49 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
SH3D21A4FU49 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.12■□□□□ 0.97
SH3D21A4FU49 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.12■□□□□ 0.97
SH3D21A4FU49 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SH3D21A4FU49 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SH3D21A4FU49 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SH3D21A4FU49 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SH3D21A4FU49 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SH3D21A4FU49 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
SH3D21A4FU49 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SH3D21A4FU49 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
SH3D21A4FU49 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.11■□□□□ 0.97
SH3D21A4FU49 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SH3D21A4FU49 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SH3D21A4FU49 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
SH3D21A4FU49 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SH3D21A4FU49 CLDN5-201ENST00000403084 2357 ntBASIC21.1■□□□□ 0.97
SH3D21A4FU49 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SH3D21A4FU49 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
SH3D21A4FU49 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SH3D21A4FU49 GUSBP5-201ENST00000418136 578 ntBASIC21.1■□□□□ 0.97
SH3D21A4FU49 C9orf163-202ENST00000624034 2573 ntBASIC21.1■□□□□ 0.97
SH3D21A4FU49 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
SH3D21A4FU49 AL117328.2-201ENST00000624617 1940 ntBASIC21.1■□□□□ 0.97
SH3D21A4FU49 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.09■□□□□ 0.97
SH3D21A4FU49 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SH3D21A4FU49 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
SH3D21A4FU49 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
SH3D21A4FU49 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SH3D21A4FU49 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SH3D21A4FU49 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SH3D21A4FU49 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.08■□□□□ 0.97
SH3D21A4FU49 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
SH3D21A4FU49 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.08■□□□□ 0.97
SH3D21A4FU49 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SH3D21A4FU49 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SH3D21A4FU49 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.08■□□□□ 0.97
SH3D21A4FU49 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
SH3D21A4FU49 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.08■□□□□ 0.97
SH3D21A4FU49 KRT18P10-201ENST00000388836 1287 ntBASIC21.08■□□□□ 0.97
SH3D21A4FU49 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SH3D21A4FU49 LONRF2P2-201ENST00000439212 571 ntBASIC21.08■□□□□ 0.97
SH3D21A4FU49 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SH3D21A4FU49 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.08■□□□□ 0.97
SH3D21A4FU49 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.08■□□□□ 0.97
SH3D21A4FU49 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.08■□□□□ 0.97
SH3D21A4FU49 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SH3D21A4FU49 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.08■□□□□ 0.96
SH3D21A4FU49 HLA-L-211ENST00000482052 1765 ntBASIC21.08■□□□□ 0.96
SH3D21A4FU49 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
SH3D21A4FU49 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SH3D21A4FU49 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
SH3D21A4FU49 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SH3D21A4FU49 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.07■□□□□ 0.96
SH3D21A4FU49 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
SH3D21A4FU49 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SH3D21A4FU49 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SH3D21A4FU49 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SH3D21A4FU49 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SH3D21A4FU49 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.07■□□□□ 0.96
SH3D21A4FU49 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.07■□□□□ 0.96
SH3D21A4FU49 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
SH3D21A4FU49 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SH3D21A4FU49 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SH3D21A4FU49 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SH3D21A4FU49 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
SH3D21A4FU49 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SH3D21A4FU49 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SH3D21A4FU49 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.06■□□□□ 0.96
SH3D21A4FU49 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.06■□□□□ 0.96
SH3D21A4FU49 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.06■□□□□ 0.96
SH3D21A4FU49 AC131212.1-201ENST00000613771 668 ntBASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms