Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
TCRBV3S1A0A5B6 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TCRBV3S1A0A5B6 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.51■■□□□ 1.03
TCRBV3S1A0A5B6 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
TCRBV3S1A0A5B6 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TCRBV3S1A0A5B6 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.51■■□□□ 1.03
TCRBV3S1A0A5B6 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
TCRBV3S1A0A5B6 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
TCRBV3S1A0A5B6 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TCRBV3S1A0A5B6 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
TCRBV3S1A0A5B6 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TCRBV3S1A0A5B6 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TCRBV3S1A0A5B6 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
TCRBV3S1A0A5B6 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TCRBV3S1A0A5B6 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TCRBV3S1A0A5B6 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TCRBV3S1A0A5B6 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TCRBV3S1A0A5B6 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
TCRBV3S1A0A5B6 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.5■■□□□ 1.03
TCRBV3S1A0A5B6 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
TCRBV3S1A0A5B6 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.5■■□□□ 1.03
TCRBV3S1A0A5B6 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
TCRBV3S1A0A5B6 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.49■■□□□ 1.03
TCRBV3S1A0A5B6 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.49■■□□□ 1.03
TCRBV3S1A0A5B6 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TCRBV3S1A0A5B6 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.49■■□□□ 1.03
TCRBV3S1A0A5B6 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
TCRBV3S1A0A5B6 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
TCRBV3S1A0A5B6 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TCRBV3S1A0A5B6 SMPD5-203ENST00000639008 1464 ntBASIC21.49■■□□□ 1.03
TCRBV3S1A0A5B6 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TCRBV3S1A0A5B6 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
TCRBV3S1A0A5B6 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TCRBV3S1A0A5B6 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TCRBV3S1A0A5B6 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TCRBV3S1A0A5B6 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21.48■■□□□ 1.03
TCRBV3S1A0A5B6 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
TCRBV3S1A0A5B6 AL024507.2-201ENST00000606070 2574 ntBASIC21.48■■□□□ 1.03
TCRBV3S1A0A5B6 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TCRBV3S1A0A5B6 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
TCRBV3S1A0A5B6 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.47■■□□□ 1.03
TCRBV3S1A0A5B6 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TCRBV3S1A0A5B6 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.47■■□□□ 1.03
TCRBV3S1A0A5B6 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TCRBV3S1A0A5B6 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.47■■□□□ 1.03
TCRBV3S1A0A5B6 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TCRBV3S1A0A5B6 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TCRBV3S1A0A5B6 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.47■■□□□ 1.03
TCRBV3S1A0A5B6 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
TCRBV3S1A0A5B6 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TCRBV3S1A0A5B6 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
TCRBV3S1A0A5B6 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TCRBV3S1A0A5B6 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.46■■□□□ 1.03
TCRBV3S1A0A5B6 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.46■■□□□ 1.03
TCRBV3S1A0A5B6 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.46■■□□□ 1.03
TCRBV3S1A0A5B6 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.46■■□□□ 1.03
TCRBV3S1A0A5B6 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.46■■□□□ 1.03
TCRBV3S1A0A5B6 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TCRBV3S1A0A5B6 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TCRBV3S1A0A5B6 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
TCRBV3S1A0A5B6 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
TCRBV3S1A0A5B6 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
TCRBV3S1A0A5B6 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
TCRBV3S1A0A5B6 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.45■■□□□ 1.02
TCRBV3S1A0A5B6 CR559946.2-201ENST00000623684 991 ntBASIC21.45■■□□□ 1.02
TCRBV3S1A0A5B6 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TCRBV3S1A0A5B6 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TCRBV3S1A0A5B6 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TCRBV3S1A0A5B6 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TCRBV3S1A0A5B6 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC21.45■■□□□ 1.02
TCRBV3S1A0A5B6 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
TCRBV3S1A0A5B6 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
TCRBV3S1A0A5B6 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.44■■□□□ 1.02
TCRBV3S1A0A5B6 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TCRBV3S1A0A5B6 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.44■■□□□ 1.02
TCRBV3S1A0A5B6 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TCRBV3S1A0A5B6 AC242852.2-201ENST00000615738 1807 ntBASIC21.44■■□□□ 1.02
TCRBV3S1A0A5B6 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
TCRBV3S1A0A5B6 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TCRBV3S1A0A5B6 AL161729.1-201ENST00000604104 1402 ntBASIC21.44■■□□□ 1.02
TCRBV3S1A0A5B6 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
TCRBV3S1A0A5B6 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.44■■□□□ 1.02
TCRBV3S1A0A5B6 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.44■■□□□ 1.02
TCRBV3S1A0A5B6 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TCRBV3S1A0A5B6 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.44■■□□□ 1.02
TCRBV3S1A0A5B6 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
TCRBV3S1A0A5B6 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TCRBV3S1A0A5B6 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.43■■□□□ 1.02
TCRBV3S1A0A5B6 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TCRBV3S1A0A5B6 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TCRBV3S1A0A5B6 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TCRBV3S1A0A5B6 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TCRBV3S1A0A5B6 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TCRBV3S1A0A5B6 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
TCRBV3S1A0A5B6 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.42■■□□□ 1.02
TCRBV3S1A0A5B6 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
TCRBV3S1A0A5B6 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TCRBV3S1A0A5B6 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TCRBV3S1A0A5B6 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.42■■□□□ 1.02
TCRBV3S1A0A5B6 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms